RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ASPHD2Q6ICH7 369 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 KLHL10Q6JEL2 608 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 OGFOD2Q6N063 350 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 MIS18BP1Q6P0N0 1132 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 PSRC1Q6PGN9 363 aaPredicted RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 SIAH3Q8IW03 269 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 PHC2Q8IXK0 858 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TMEM123Q8N131 208 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 THEM5Q8N1Q8 247 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ZNF321PQ8N8H1 164 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TRPV3Q8NET8 790 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 OR4K1Q8NGD4 311 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ANKRD49Q8WVL7 239 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 FCGR1BQ92637 280 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 CASP10Q92851 521 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 RAB40CQ96S21 281 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 LMF2Q9BU23 707 aaKnown RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 IDI2Q9BXS1 227 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TM6SF1Q9BZW5 370 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 C5orf66Q9H5L9 145 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 MED20Q9H944 212 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TXNDC16Q9P2K2 825 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 C11orf21Q9P2W6 132 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 MALT1Q9UDY8 824 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 LRWD1Q9UFC0 647 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 PISDQ9UG56 409 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 LEF1Q9UJU2 399 aaPredicted RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 TTC7AQ9ULT0 858 aaPredicted RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 RAI2Q9Y5P3 530 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 EVPLQ92817 2033 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 CNTNAP1P78357 1384 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 CCDC7Q96M83 1385 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 SLIT3O75094 1523 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 C13orf42A0A1B0GVH6 325 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 SLC28A1O00337 649 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 SNNO75324 88 aaPredicted RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 PIGNO95427 931 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 ASGR1P07306 291 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 SELENOVP59797 346 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 NHLH1Q02575 133 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 GRIK2Q13002 908 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 BTG3Q14201 252 aaPredicted RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 P2RY14Q15391 338 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 PDK4Q16654 411 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 CLPPQ16740 277 aaPredicted RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 DUSP6Q16828 381 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 ZC2HC1CQ53FD0 456 aaPredicted RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 ZNF385BQ569K4 471 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 LIPJQ5W064 366 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 PRR27Q6MZM9 219 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 ZSCAN25Q6NSZ9 544 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 DEF8Q6ZN54 512 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 ZNF627Q7L945 461 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 OR52K2Q8NGK3 314 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 UBTD2Q8WUN7 234 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 P2RX5Q93086 422 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 LGALS12Q96DT0 336 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 COG3Q96JB2 828 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 PANX1Q96RD7 426 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 SEPHS2Q99611 448 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 CAPS2Q9BXY5 557 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 NLNQ9BYT8 704 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 PRRG4Q9BZD6 226 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 NT5C3AQ9H0P0 336 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 ARRDC1-AS1Q9H2J1 176 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 UBQLN3Q9H347 655 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 RHOJQ9H4E5 214 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 MAGEF1Q9HAY2 307 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 RCC2Q9P258 522 aaKnown RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 RAPGEFL1Q9UHV5 662 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 KIAA1257Q9ULG3 409 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 LOXL2Q9Y4K0 774 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 SPATA31E1Q6ZUB1 1445 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 VPS8Q8N3P4 1428 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 PDS5AQ29RF7 1337 aaKnown RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 PKD1L2Q7Z442 2459 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 TRPM7Q96QT4 1865 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 USP6P35125 1406 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 CCDC162PA2VCL2 907 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 DPPA5A6NC42 116 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 ASPDHA6ND91 283 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 CHUKO15111 745 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 MID1O15344 667 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 TSC22D2O75157 780 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 OPN1LWP04000 364 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 GNSP15586 552 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 ACRV1P26436 265 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 ALDH4A1P30038 563 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 HOXC9P31274 260 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 CASQ1P31415 396 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 GPR12P47775 334 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 CDX1P47902 265 aaPredicted RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 ASCL1P50553 236 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 MMP15P51511 669 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 RAG2P55895 527 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 MAP2K1Q02750 393 aaPredicted RBP2.47□□□□□ -2.01
XRN1-210ENST00000472697 TGM3Q08188 693 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 BST1Q10588 318 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 TAF10Q12962 218 aa2.47□□□□□ -2.01
XRN1-210ENST00000472697 PDZK1IP1Q13113 114 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms