RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CLDN16Q9Y5I7 305 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 CAPN6Q9Y6Q1 641 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 MXRA5Q9NR99 2828 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 HIVEP2P31629 2446 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 MIF4GDA9UHW6 222 aaKnown RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 C4orf51C9J302 202 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 CHST10O43529 356 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 PEX1O43933 1283 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 PRKNO60260 465 aaPredicted RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 PRMT3O60678 531 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 GALR3O60755 368 aaPredicted RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 B4GALT2O60909 372 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 CATP04040 527 aaKnown RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 PTMAP06454 111 aaKnown RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 C8BP07358 591 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 FHP07954 510 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 NPPBP16860 134 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 PCSK6P29122 969 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 HSD17B2P37059 387 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 NPY2RP49146 381 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 CYB561P49447 251 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 HLCSP50747 726 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 GPR143P51810 404 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 NUP107P57740 925 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 GPR85P60893 370 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 RPS15AP62244 130 aaKnown RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 MEF2AQ02078 507 aaPredicted RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 PMPCAQ10713 525 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 CTBP1Q13363 440 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 KEAP1Q14145 624 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 FBXW10Q5XX13 1052 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 RTL6Q6ICC9 239 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 CAPN13Q6MZZ7 669 aaPredicted RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 C16orf47Q6ZP98 133 aaPredicted RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 PIWIL4Q7Z3Z4 852 aaKnown RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 SDCCAG8Q86SQ7 713 aaPredicted RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 ASPGQ86U10 573 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 SLC13A5Q86YT5 568 aaPredicted RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 CILP2Q8IUL8 1156 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 TMEM139Q8IV31 216 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 LIX1LQ8IVB5 337 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 OTUD6BQ8N6M0 293 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 UBL4BQ8N7F7 174 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 APCDD1LQ8NCL9 501 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 SLC13A3Q8WWT9 602 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 TMEM125Q96AQ2 219 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 SEC16BQ96JE7 1060 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 CALR3Q96L12 384 aaKnown RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 TCF12Q99081 682 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 AICDAQ9GZX7 198 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 DEFB127Q9H1M4 99 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 SPNS1Q9H2V7 528 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 ZNF395Q9H8N7 513 aaPredicted RBP8.7□□□□□ -1.02
VCL-204ENST00000472585 ANKHQ9HCJ1 492 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 RASSF1Q9NS23 344 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 PAK5Q9P286 719 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 SOX13Q9UN79 622 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 DHRS7Q9Y394 339 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 SLC22A7Q9Y694 548 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 ZNF407Q9C0G0 2248 aa8.7□□□□□ -1.02
VCL-204ENST00000472585 MPDZO75970 2070 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 IGKV3D-11A0A0A0MRZ8 115 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 A8MUA0 341 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 TGFBR3LH3BV60 316 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 KIF5CO60282 957 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 CCNDBP1O95273 360 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 RAF1P04049 648 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 MPC1LP0DKB6 136 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 CDH1P12830 882 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 MAOAP21397 527 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 KIR2DL3P43628 341 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 KCNJ1P48048 391 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 PGGT1BP53609 377 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 TERF1P54274 439 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 TAS2R50P59544 299 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 TBPL1P62380 186 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 PPP2R2BQ00005 443 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 MPP1Q00013 466 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 HYAL2Q12891 473 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 DEFB113Q30KQ7 82 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 GXYLT1Q4G148 440 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 DEFB134Q4QY38 66 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 XKR6Q5GH73 641 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 THEMIS2Q5TEJ8 643 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 MRNIPQ6NTE8 343 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 NEPROQ6NW34 567 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 ARSKQ6UWY0 536 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 CAND1Q86VP6 1230 aaKnown RBP8.69□□□□□ -1.02
VCL-204ENST00000472585 CDC20BQ86Y33 519 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 CPNE9Q8IYJ1 553 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 CYP4X1Q8N118 509 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 AGGF1Q8N302 714 aaeCLIP8.69□□□□□ -1.02
VCL-204ENST00000472585 ZFP62Q8NB50 900 aaPredicted RBP8.69□□□□□ -1.02
VCL-204ENST00000472585 POGLUT1Q8NBL1 392 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 MFSD9Q8NBP5 474 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 OR5M3Q8NGP4 307 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 CD200R1Q8TD46 325 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 TBC1D20Q96BZ9 403 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 PTCHD1Q96NR3 888 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 OR1F2PQ96R84 312 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms