RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 NKX2-8O15522 239 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 ERI3O43414 337 aaKnown RBP14.32□□□□□ -0.12
SNX13-205ENST00000471744 TYROBPO43914 113 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 SPAG7O75391 227 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 ITGB2P05107 769 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 CYC1P08574 325 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 ZGLP1P0C6A0 271 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 SMIM10L1P0DMW3 83 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 H2AFXP16104 143 aaPredicted RBP14.32□□□□□ -0.12
SNX13-205ENST00000471744 ARFIP1P53367 373 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 CDH13P55290 713 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 PKNOX1P55347 436 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 RPS18P62269 152 aaKnown RBP14.32□□□□□ -0.12
SNX13-205ENST00000471744 IFT88Q13099 833 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 ERV3-1Q14264 604 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 ZRSR2Q15696 482 aaKnown RBP14.32□□□□□ -0.12
SNX13-205ENST00000471744 DEFB134Q4QY38 66 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 TTC19Q6DKK2 380 aaPredicted RBP14.32□□□□□ -0.12
SNX13-205ENST00000471744 GPRIN3Q6ZVF9 776 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 VN1R5Q7Z5H4 357 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 EXOC3L1Q86VI1 746 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 DTWD1Q8N5C7 304 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 CCNYL1Q8N7R7 359 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 OR4F6Q8NGB9 312 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 HUS1BQ8NHY5 278 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 TRPC4APQ8TEL6 797 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 SMIM10Q96HG1 83 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 SPSB2Q99619 263 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 YIPF2Q9BWQ6 316 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 NPLQ9BXD5 320 aaPredicted RBP14.32□□□□□ -0.12
SNX13-205ENST00000471744 MS4A8Q9BY19 250 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 SEMA3GQ9NS98 782 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 SNX6Q9UNH7 406 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 KMT2BQ9UMN6 2715 aaPredicted RBP14.32□□□□□ -0.12
SNX13-205ENST00000471744 CDC14CA4D256 554 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 SGK494L7N484 410 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 TRIM13O60858 407 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 CNOT3O75175 753 aaKnown RBP14.31□□□□□ -0.12
SNX13-205ENST00000471744 RDH16O75452 317 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 ENO1P06733 434 aaKnown RBP14.31□□□□□ -0.12
SNX13-205ENST00000471744 PRKAR1AP10644 381 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 PTX3P26022 381 aaPredicted RBP14.31□□□□□ -0.12
SNX13-205ENST00000471744 HNRNPH1P31943 449 aaKnown RBP14.31□□□□□ -0.12
SNX13-205ENST00000471744 TSFMP43897 325 aaKnown RBP14.31□□□□□ -0.12
SNX13-205ENST00000471744 NAGLUP54802 743 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 RAB8AP61006 207 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 DDX39BQ13838 428 aaKnown RBP14.31□□□□□ -0.12
SNX13-205ENST00000471744 PCLAFQ15004 111 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 FRG2Q64ET8 278 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 PRSS41Q7RTY9 318 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 HDXQ7Z353 690 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 PDSS2Q86YH6 399 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 OR51Q1Q8NH59 317 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 WDR20Q8TBZ3 569 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 ADAMTS18Q8TE60 1221 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 KCNC2Q96PR1 638 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 CDK15Q96Q40 435 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 FRG2BQ96QU4 278 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 OR1F2PQ96R84 312 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 TBCDQ9BTW9 1192 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 TRMOQ9BU70 441 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 SLC29A3Q9BZD2 475 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 KLHL31Q9H511 634 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 ELOVL6Q9H5J4 265 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 COPS7BQ9H9Q2 264 aaPredicted RBP14.31□□□□□ -0.12
SNX13-205ENST00000471744 DMRT3Q9NQL9 472 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 MED13Q9UHV7 2174 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 FAM208BQ5VWN6 2430 aa14.31□□□□□ -0.12
SNX13-205ENST00000471744 B3GALT2O43825 422 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 ESRRBO95718 433 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 KRT6AP02538 564 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 KRT6BP04259 564 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 MMP11P24347 488 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 KRT6CP48668 564 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 MTTPP55157 894 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 BTN3A2P78410 334 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 ZNF33BQ06732 778 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 CUL3Q13618 768 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 IL10RAQ13651 578 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 COL9A2Q14055 689 aaPredicted RBP14.3□□□□□ -0.12
SNX13-205ENST00000471744 RCN2Q14257 317 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 DEPDC1Q5TB30 811 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 KHDRBS2Q5VWX1 349 aaKnown RBP14.3□□□□□ -0.12
SNX13-205ENST00000471744 ADNP2Q6IQ32 1131 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 LETMD1Q6P1Q0 360 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 ABHD17CQ6PCB6 329 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 FRMD7Q6ZUT3 714 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 RPS27LQ71UM5 84 aaKnown RBP14.3□□□□□ -0.12
SNX13-205ENST00000471744 C10orf107Q8IVU9 208 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 ADAMTS17Q8TE56 1095 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 SERINC2Q96SA4 455 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 MTERF1Q99551 399 aaKnown RBP14.3□□□□□ -0.12
SNX13-205ENST00000471744 SERPINI1Q99574 410 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 CRB3Q9BUF7 120 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 C12orf65Q9H3J6 166 aaKnown RBP14.3□□□□□ -0.12
SNX13-205ENST00000471744 GSTO2Q9H4Y5 243 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 VIPAS39Q9H9C1 493 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 TMBIM4Q9HC24 238 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 SLC17A7Q9P2U7 560 aa14.3□□□□□ -0.12
SNX13-205ENST00000471744 LHX6Q9UPM6 363 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms