RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 CYTIPO60759 359 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 BCAS2O75934 225 aaPredicted RBP3.58□□□□□ -1.84
PRPF3-204ENST00000470824 MT-ND2P03891 347 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 FERP16591 822 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 AADACP22760 399 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 CHRNB4P30926 498 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 CDKN1AP38936 164 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 SLC1A3P43003 542 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 CLCN4P51793 760 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 OR1D5P58170 312 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 YBEYP58557 167 aaPredicted RBP3.58□□□□□ -1.84
PRPF3-204ENST00000470824 SP3Q02447 781 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 ITGA9Q13797 1035 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 PDE7AQ13946 482 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 DUSP5Q16690 384 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 FFAR4Q5NUL3 377 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 C9orf50Q5SZB4 431 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 SLC27A4Q6P1M0 643 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 CNSTQ6PJW8 725 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 C5orf24Q7Z6I8 188 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 NR2C2APQ86WQ0 139 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 APLFQ8IW19 511 aaPredicted RBP3.58□□□□□ -1.84
PRPF3-204ENST00000470824 CCDC185Q8N715 623 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 OR5AP2Q8NGF4 316 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 ZNRF4Q8WWF5 429 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 FAM46BQ96A09 425 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 CDHR1Q96JP9 859 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 NECTIN4Q96NY8 510 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 PRAM1Q96QH2 718 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 NAP1L3Q99457 506 aaPredicted RBP3.58□□□□□ -1.84
PRPF3-204ENST00000470824 IL12RB2Q99665 862 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 PIGQQ9BRB3 760 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 FAM213AQ9BRX8 229 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 SPXQ9BT56 116 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 FUCA2Q9BTY2 467 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 TDRD1Q9BXT4 1180 aaKnown RBP3.58□□□□□ -1.84
PRPF3-204ENST00000470824 TRIM7Q9C029 511 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 TNMDQ9H2S6 317 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 ZDHHC6Q9H6R6 413 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 ZNF71Q9NQZ8 489 aaPredicted RBP3.58□□□□□ -1.84
PRPF3-204ENST00000470824 PRMT8Q9NR22 394 aaPredicted RBP3.58□□□□□ -1.84
PRPF3-204ENST00000470824 ANO10Q9NW15 660 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 WWOXQ9NZC7 414 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 PROCRQ9UNN8 238 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 SATB2Q9UPW6 733 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 FOXA2Q9Y261 457 aaPredicted RBP3.58□□□□□ -1.84
PRPF3-204ENST00000470824 UACAQ9BZF9 1416 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 WDR7Q9Y4E6 1490 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 DISP1Q96F81 1524 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 KDM5BQ9UGL1 1544 aa3.58□□□□□ -1.84
PRPF3-204ENST00000470824 A0A087WW49 117 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 CCDC162PA2VCL2 907 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 SLC9B1P1A6NJY1 282 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 ZNF732B4DXR9 585 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 SLCO1B7G3V0H7 640 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 SAP30O75446 220 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 KHDRBS3O75525 346 aaKnown RBP3.57□□□□□ -1.84
PRPF3-204ENST00000470824 ZNF432O94892 652 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 TYMPP19971 482 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 OR3A2P47893 321 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 SRSF9Q13242 221 aaKnown RBP eCLIP3.57□□□□□ -1.84
PRPF3-204ENST00000470824 TSTA3Q13630 321 aaPredicted RBP3.57□□□□□ -1.84
PRPF3-204ENST00000470824 CDH18Q13634 790 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 GRB14Q14449 540 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 TMEM132DQ14C87 1099 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 PKN2Q16513 984 aaKnown RBP3.57□□□□□ -1.84
PRPF3-204ENST00000470824 FRMPD1Q5SYB0 1578 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 RUSC1-AS1Q66K80 236 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 TCEAL6Q6IPX3 200 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 FAM53AQ6NSI3 398 aaPredicted RBP3.57□□□□□ -1.84
PRPF3-204ENST00000470824 CD164L2Q6UWJ8 174 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 BTN2A1Q7KYR7 527 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 TRMT11Q7Z4G4 463 aaKnown RBP3.57□□□□□ -1.84
PRPF3-204ENST00000470824 KIF27Q86VH2 1401 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 LACC1Q8IV20 430 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 ZNF619Q8N2I2 560 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 RAB42Q8N4Z0 105 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 NEK11Q8NG66 645 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 OR4D10Q8NGI6 311 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 GATAD1Q8WUU5 269 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 ZNF560Q96MR9 790 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 GUCD1Q96NT3 240 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 NEDD4LQ96PU5 975 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 TMEM237Q96Q45 408 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 F2RL3Q96RI0 385 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 RUFY1Q96T51 708 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 DDX50Q9BQ39 737 aaKnown RBP3.57□□□□□ -1.84
PRPF3-204ENST00000470824 LRRC2Q9BYS8 371 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 SIGLEC1Q9BZZ2 1709 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 MTIF3Q9H2K0 278 aaKnown RBP3.57□□□□□ -1.84
PRPF3-204ENST00000470824 ZCCHC3Q9NUD5 404 aaKnown RBP3.57□□□□□ -1.84
PRPF3-204ENST00000470824 C2orf42Q9NWW7 574 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 FETUBQ9UGM5 382 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 ZNF580Q9UK33 172 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 POMT2Q9UKY4 750 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 ODF2LQ9ULJ1 636 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 WDR37Q9Y2I8 494 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 TEX264Q9Y6I9 313 aa3.57□□□□□ -1.84
PRPF3-204ENST00000470824 RICTORQ6R327 1708 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 ABCA9Q8IUA7 1624 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms