RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TMEM26Q6ZUK4 368 aa17.3■□□□□ 0.36
SMC4-211ENST00000469858 IKBIPQ70UQ0 350 aa17.3■□□□□ 0.36
SMC4-211ENST00000469858 TRPV3Q8NET8 790 aa17.3■□□□□ 0.36
SMC4-211ENST00000469858 ZNF583Q96ND8 569 aa17.3■□□□□ 0.36
SMC4-211ENST00000469858 QRFPRQ96P65 431 aa17.3■□□□□ 0.36
SMC4-211ENST00000469858 FCRL4Q96PJ5 515 aa17.3■□□□□ 0.36
SMC4-211ENST00000469858 BHLHE41Q9C0J9 482 aaPredicted RBP17.3■□□□□ 0.36
SMC4-211ENST00000469858 MIEF1Q9NQG6 463 aa17.3■□□□□ 0.36
SMC4-211ENST00000469858 ATAD3AQ9NVI7 634 aa17.3■□□□□ 0.36
SMC4-211ENST00000469858 HRASLS2Q9NWW9 162 aa17.3■□□□□ 0.36
SMC4-211ENST00000469858 C2orf74A8MZ97 194 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 SSR2P43308 183 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 HYAL2Q12891 473 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 TMEM35AQ53FP2 167 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 ANXA8L1Q5VT79 327 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 OR4C11Q6IEV9 310 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 GKN2Q86XP6 184 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 PQLC1Q8N2U9 271 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 OR2T12Q8NG77 320 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 DNASE2BQ8WZ79 361 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 CCDC115Q96NT0 180 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 TBCDQ9BTW9 1192 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 KLHL25Q9H0H3 589 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 ERVK-11Q9UQG0 969 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 PCDHB3Q9Y5E6 796 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 PCDHGA2Q9Y5H1 932 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 SDK1Q7Z5N4 2213 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 AQP12BA6NM10 295 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 ERI3O43414 337 aaKnown RBP17.29■□□□□ 0.36
SMC4-211ENST00000469858 HNRNPFP52597 415 aaKnown RBP17.29■□□□□ 0.36
SMC4-211ENST00000469858 RPS15AP62244 130 aaKnown RBP17.29■□□□□ 0.36
SMC4-211ENST00000469858 AASDHQ4L235 1098 aaPredicted RBP17.29■□□□□ 0.36
SMC4-211ENST00000469858 TOR1AIP1Q5JTV8 583 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 SPESP1Q6UW49 350 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 AQP12AQ8IXF9 295 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 AMER3Q8N944 861 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 CIDECQ96AQ7 238 aaPredicted RBP17.29■□□□□ 0.36
SMC4-211ENST00000469858 TM4SF18Q96CE8 201 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 MS4A6EQ96DS6 147 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 TEFMQ96QE5 360 aaKnown RBP17.29■□□□□ 0.36
SMC4-211ENST00000469858 DUSP15Q9H1R2 295 aaPredicted RBP17.29■□□□□ 0.36
SMC4-211ENST00000469858 KAT8Q9H7Z6 458 aaKnown RBP17.29■□□□□ 0.36
SMC4-211ENST00000469858 COPS7BQ9H9Q2 264 aaPredicted RBP17.29■□□□□ 0.36
SMC4-211ENST00000469858 BTNL2Q9UIR0 455 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 ENTPD2Q9Y5L3 495 aa17.29■□□□□ 0.36
SMC4-211ENST00000469858 OR2A25A4D2G3 310 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 C4orf51C9J302 202 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 RNASET2O00584 256 aaKnown RBP17.28■□□□□ 0.36
SMC4-211ENST00000469858 BCAT2O15382 392 aaPredicted RBP17.28■□□□□ 0.36
SMC4-211ENST00000469858 TMPRSS11DO60235 418 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 SDC3O75056 442 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 EPN2O95208 641 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 FNTBP49356 437 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 C21orf59P57076 290 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 KLC1Q07866 573 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 FXNQ16595 210 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 WDR45BQ5MNZ6 344 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 TICAM1Q8IUC6 712 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 RBM12BQ8IXT5 1001 aaKnown RBP17.28■□□□□ 0.36
SMC4-211ENST00000469858 C10orf111Q8N326 155 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 DTWD1Q8N5C7 304 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 ZNF548Q8NEK5 533 aaPredicted RBP17.28■□□□□ 0.36
SMC4-211ENST00000469858 SLCO4A1Q96BD0 722 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 MTERF3Q96E29 417 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 DDX31Q9H8H2 851 aaKnown RBP17.28■□□□□ 0.36
SMC4-211ENST00000469858 C6orf203Q9P0P8 240 aaPredicted RBP17.28■□□□□ 0.36
SMC4-211ENST00000469858 MAGEL2Q9UJ55 1249 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 ADAM29Q9UKF5 820 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 AP3M1Q9Y2T2 418 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 C15orf41Q9Y2V0 281 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 AP4S1Q9Y587 144 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 VILLO15195 856 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 C1QCP02747 245 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 ABCB1P08183 1280 aaPredicted RBP17.28■□□□□ 0.36
SMC4-211ENST00000469858 PVRP15151 417 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 TYRP1P17643 537 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 ALDH9A1P49189 494 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 HNRNPKP61978 463 aaKnown RBP eCLIP17.28■□□□□ 0.365e-13■■■■■ 46
SMC4-211ENST00000469858 SLC14A1Q13336 389 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 MPEG1Q2M385 716 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 ADPRMQ3LIE5 342 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 FCRL6Q6DN72 434 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 GLYATQ6IB77 296 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 FIGLAQ6QHK4 219 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 ZNF793Q6ZN11 406 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 OOSP2Q86WS3 158 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 PROSER1Q86XN7 944 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 OR4A15Q8NGL6 344 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 CANT1Q8WVQ1 401 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 RSC1A1Q92681 617 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 FAM120BQ96EK7 910 aaKnown RBP17.28■□□□□ 0.36
SMC4-211ENST00000469858 EVA1BQ9NVM1 165 aa17.28■□□□□ 0.36
SMC4-211ENST00000469858 A0A0A6YYD5 115 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 EVPLLA8MZ36 301 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 CLIC1O00299 241 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 AQP9O43315 295 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 TNFSF14O43557 240 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 CTSVO60911 334 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 ENGP17813 658 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 DDCP20711 480 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms