RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 VPS4AQ9UN37 437 aa10.88□□□□□ -0.67
CDHR3-205ENST00000468143 A0A1W2PQ72 361 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 LRIT2A6NDA9 550 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 LRRC14BA6NHZ5 514 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 SH3BGRLO75368 114 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 KLHL2O95198 593 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 TBX6O95947 436 aaPredicted RBP10.87□□□□□ -0.67
CDHR3-205ENST00000468143 MTHFD2P13995 350 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 MSH2P43246 934 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 SERPINB8P50452 374 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 ST13P50502 369 aaKnown RBP10.87□□□□□ -0.67
CDHR3-205ENST00000468143 PLA2G16P53816 162 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 STXBP1P61764 594 aaKnown RBP10.87□□□□□ -0.67
CDHR3-205ENST00000468143 ACTN3Q08043 901 aaPredicted RBP10.87□□□□□ -0.67
CDHR3-205ENST00000468143 MFAP5Q13361 173 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 RUNX2Q13950 521 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 ABRAXAS2Q15018 415 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 ACAP2Q15057 778 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 HIST2H2ACQ16777 129 aaPredicted RBP10.87□□□□□ -0.67
CDHR3-205ENST00000468143 PFKFB4Q16877 469 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 FAM83EQ2M2I3 478 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 BTBD16Q32M84 506 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 SFT2D3Q587I9 215 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 CRB2Q5IJ48 1285 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 FCRLBQ6BAA4 426 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 HIST2H2AA3Q6FI13 130 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 IGFL2Q6UWQ7 119 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 LRRC70Q7Z2Q7 622 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 IFT20Q8IY31 132 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 IQCKQ8N0W5 287 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 CYP4X1Q8N118 509 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 CA13Q8N1Q1 262 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 TEX9Q8N6V9 391 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 PLPP5Q8NEB5 264 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 MS4A6EQ96DS6 147 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 FAR2Q96K12 515 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 PTCHD1Q96NR3 888 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 GPR78Q96P69 363 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 OR1F2PQ96R84 312 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 F2RL3Q96RI0 385 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 LMF1Q96S06 567 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 PAFAH2Q99487 392 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 WDR77Q9BQA1 342 aaPredicted RBP10.87□□□□□ -0.67
CDHR3-205ENST00000468143 TUBB6Q9BUF5 446 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 FUT8Q9BYC5 575 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 EHD1Q9H4M9 534 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 NT5DC2Q9H857 520 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 ASF1BQ9NVP2 202 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 OPTCQ9UBM4 332 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 C19orf25Q9UFG5 118 aaPredicted RBP10.87□□□□□ -0.67
CDHR3-205ENST00000468143 IKBKGQ9Y6K9 419 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 HEATR5BQ9P2D3 2071 aa10.87□□□□□ -0.67
CDHR3-205ENST00000468143 MDC1Q14676 2089 aaKnown RBP10.86□□□□□ -0.67
CDHR3-205ENST00000468143 A0A087WUV0 522 aaPredicted RBP10.86□□□□□ -0.67
CDHR3-205ENST00000468143 A8MUA0 341 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 MAGEB17A8MXT2 336 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 TCP11X1B4DZS4 312 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 K7EPI3 171 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 PSMD12O00232 456 aaPredicted RBP10.86□□□□□ -0.67
CDHR3-205ENST00000468143 PCDH17O14917 1159 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 ERI3O43414 337 aaKnown RBP10.86□□□□□ -0.67
CDHR3-205ENST00000468143 CLEC3AO75596 197 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 FAM153BP0C7A2 387 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 PCNAP12004 261 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 ICAM2P13598 275 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 GFAPP14136 432 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 MAOAP21397 527 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 IL10P22301 178 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 OR4D2P58180 307 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 SKP1P63208 163 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 ARG2P78540 354 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 FAM153CQ494X1 144 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 NIPAL1Q6NVV3 410 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 PAPD4Q6PIY7 484 aaKnown RBP10.86□□□□□ -0.67
CDHR3-205ENST00000468143 MYLK4Q86YV6 388 aaPredicted RBP10.86□□□□□ -0.67
CDHR3-205ENST00000468143 RNF175Q8N4F7 328 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 TTLQ8NG68 377 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 OR1N1Q8NGS0 311 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 RHEBL1Q8TAI7 183 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 PPP4R1Q8TF05 950 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 DCAKDQ8WVC6 231 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 GAL3ST3Q96A11 431 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 WDR34Q96EX3 536 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 EFCAB11Q9BUY7 163 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 REXO4Q9GZR2 422 aaKnown RBP10.86□□□□□ -0.67
CDHR3-205ENST00000468143 NECTIN3Q9NQS3 549 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 STMN3Q9NZ72 180 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 CPSF2Q9P2I0 782 aaKnown RBP10.86□□□□□ -0.67
CDHR3-205ENST00000468143 COPG2Q9UBF2 871 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 NTNG1Q9Y2I2 539 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 ANGPTL3Q9Y5C1 460 aa10.86□□□□□ -0.67
CDHR3-205ENST00000468143 COPG1Q9Y678 874 aaKnown RBP10.86□□□□□ -0.67
CDHR3-205ENST00000468143 TLN1Q9Y490 2541 aaKnown RBP10.86□□□□□ -0.67
CDHR3-205ENST00000468143 SYCE1LA8MT33 242 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 TRIM49D1C9J1S8 452 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 SAP18O00422 153 aaKnown RBP10.85□□□□□ -0.67
CDHR3-205ENST00000468143 PRMT3O60678 531 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 SIX3O95343 332 aaPredicted RBP10.85□□□□□ -0.67
CDHR3-205ENST00000468143 WDPCPO95876 746 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 TGFB1P01137 390 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms