RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 CREB1P16220 341 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 IL10P22301 178 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 MMP11P24347 488 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 PTX3P26022 381 aaPredicted RBP12.88□□□□□ -0.35
SSBP1-206ENST00000467681 OTX2P32243 289 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 CCR10P46092 362 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 EMP2P54851 167 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 NAA20P61599 178 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 KLC1Q07866 573 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 ZRSR2Q15696 482 aaKnown RBP12.88□□□□□ -0.35
SSBP1-206ENST00000467681 TMEM35AQ53FP2 167 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 DEPDC1Q5TB30 811 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 ABHD17CQ6PCB6 329 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 BORAQ6PGQ7 559 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 SHISA6Q6ZSJ9 500 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 CHSY3Q70JA7 882 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 RPS27LQ71UM5 84 aaKnown RBP12.88□□□□□ -0.35
SSBP1-206ENST00000467681 PPP1R32Q7Z5V6 425 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 UBE3DQ7Z6J8 389 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 ZC3H7AQ8IWR0 971 aaKnown RBP12.88□□□□□ -0.35
SSBP1-206ENST00000467681 PRSS58Q8IYP2 241 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 SHISA5Q8N114 240 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 SRFBP1Q8NEF9 429 aaKnown RBP12.88□□□□□ -0.35
SSBP1-206ENST00000467681 OR2L5Q8NG80 312 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 TRPC4APQ8TEL6 797 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 APOBEC4Q8WW27 367 aaKnown RBP12.88□□□□□ -0.35
SSBP1-206ENST00000467681 GAL3ST3Q96A11 431 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 CMTM7Q96FZ5 175 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 APOPT1Q96IL0 206 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 MAGEB10Q96LZ2 347 aaPredicted RBP12.88□□□□□ -0.35
SSBP1-206ENST00000467681 QRFPRQ96P65 431 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 CDK15Q96Q40 435 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 TMEM237Q96Q45 408 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 SMC6Q96SB8 1091 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 MS4A8Q9BY19 250 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 REXO4Q9GZR2 422 aaKnown RBP12.88□□□□□ -0.35
SSBP1-206ENST00000467681 ACSS2Q9NR19 701 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 SEMA3GQ9NS98 782 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 C14orf105Q9NVL8 296 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 OXSMQ9NWU1 459 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 SENP1Q9P0U3 644 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 HCN3Q9P1Z3 774 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 C3orf18Q9UK00 162 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 KCNMB2Q9Y691 235 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 A0A1B0GTL3 188 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 ZNF860A6NHJ4 632 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 C4orf51C9J302 202 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 ERVH48-1M5A8F1 160 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 FOXE1O00358 373 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-206ENST00000467681 ERI3O43414 337 aaKnown RBP12.87□□□□□ -0.35
SSBP1-206ENST00000467681 SPAG7O75391 227 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 MLYCDO95822 493 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 TSPAN8P19075 237 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 ARL1P40616 181 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-206ENST00000467681 XCR1P46094 333 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 NEK2P51955 445 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 PLA2G16P53816 162 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 TGM3Q08188 693 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 RBBP7Q16576 425 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 GGTA1PQ4G0N0 100 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 C10orf62Q5T681 223 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-206ENST00000467681 FRG2Q64ET8 278 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 KIRREL2Q6UWL6 708 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 MED25Q71SY5 747 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 EXOC3L1Q86VI1 746 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 APLFQ8IW19 511 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-206ENST00000467681 CCNYL1Q8N7R7 359 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 CCDC63Q8NA47 563 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 LSM14AQ8ND56 463 aaKnown RBP12.87□□□□□ -0.35
SSBP1-206ENST00000467681 ARMC2Q8NEN0 867 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 MYRIPQ8NFW9 859 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 OR4F6Q8NGB9 312 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 OR5T3Q8NGG3 340 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 WDR20Q8TBZ3 569 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 TCP10LQ8TDR4 215 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 PGM2Q96G03 612 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 FAR2Q96K12 515 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 FRG2BQ96QU4 278 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 UBL7Q96S82 380 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-206ENST00000467681 MTERF1Q99551 399 aaKnown RBP12.87□□□□□ -0.35
SSBP1-206ENST00000467681 TBCDQ9BTW9 1192 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 CRB3Q9BUF7 120 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 NPLQ9BXD5 320 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-206ENST00000467681 IQCGQ9H095 443 aaKnown RBP12.87□□□□□ -0.35
SSBP1-206ENST00000467681 PRDM7Q9NQW5 492 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 P4HTMQ9NXG6 502 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 MID2Q9UJV3 735 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 ZNF225Q9UK10 706 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 MAN2B2Q9Y2E5 1009 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 ATRXP46100 2492 aa12.87□□□□□ -0.35
SSBP1-206ENST00000467681 ZZEF1O43149 2961 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 IDSB3KWA1 339 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 PEX12O00623 359 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 TYROBPO43914 113 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 JRKO75564 520 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 NAGLUP54802 743 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 OLR1P78380 273 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 ATP1A4Q13733 1029 aa12.86□□□□□ -0.35
SSBP1-206ENST00000467681 DDX39BQ13838 428 aaKnown RBP12.86□□□□□ -0.35
SSBP1-206ENST00000467681 RUNX2Q13950 521 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms