RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ANKRD20A1Q5TYW2 823 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 ANKRD20A3Q5VUR7 823 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 PTRHD1Q6GMV3 140 aaKnown RBP9.47□□□□□ -0.89
HDAC3-203ENST00000467533 ABHD13Q7L211 337 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 OTOAQ7RTW8 1153 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 LIX1Q8N485 282 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 MEIOBQ8N635 442 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 KCT2Q8NC54 265 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 CAMKVQ8NCB2 501 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 APCDD1LQ8NCL9 501 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 FBXO15Q8NCQ5 510 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-203ENST00000467533 B3GNT7Q8NFL0 401 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 OR6P1Q8NGX9 317 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 PPP1R2P1Q96PQ5 205 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 PANX3Q96QZ0 392 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 RBM24Q9BX46 236 aaKnown RBP9.47□□□□□ -0.89
HDAC3-203ENST00000467533 PIH1D1Q9NWS0 290 aaKnown RBP9.47□□□□□ -0.89
HDAC3-203ENST00000467533 GALNT8Q9NY28 637 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 TUBA8Q9NY65 449 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-203ENST00000467533 PCDHGB3Q9Y5G1 929 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 ZNF839A8K0R7 811 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 H7BY64 318 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 SMAPO00193 183 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 CD5LO43866 347 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 ERN1O75460 977 aaKnown RBP9.46□□□□□ -0.9
HDAC3-203ENST00000467533 STK10O94804 968 aaKnown RBP9.46□□□□□ -0.9
HDAC3-203ENST00000467533 MYO1DO94832 1006 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 EPPINO95925 133 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 GOT2P00505 430 aaKnown RBP9.46□□□□□ -0.9
HDAC3-203ENST00000467533 SERPING1P05155 500 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 MAOAP21397 527 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 OPRM1P35372 400 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 PPARGP37231 505 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-203ENST00000467533 PNLIPRP1P54315 467 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 BTG2P78543 158 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 VEZF1Q14119 521 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 SEMA3AQ14563 771 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 ZNF750Q32MQ0 723 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 ANKRD20A4Q4UJ75 823 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.46□□□□□ -0.9
HDAC3-203ENST00000467533 WIPI1Q5MNZ9 446 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-203ENST00000467533 LRRC38Q5VT99 294 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 RTL4Q6ZR62 310 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 QSOX2Q6ZRP7 698 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.46□□□□□ -0.9
HDAC3-203ENST00000467533 PIK3IP1Q96FE7 263 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 VMP1Q96GC9 406 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 MRFAP1L1Q96HT8 127 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 PRAP1Q96NZ9 151 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 AARSD1Q9BTE6 412 aaKnown RBP9.46□□□□□ -0.9
HDAC3-203ENST00000467533 PACSIN1Q9BY11 444 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 SLC6A15Q9H2J7 730 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 LIN28AQ9H9Z2 209 aaKnown RBP9.46□□□□□ -0.9
HDAC3-203ENST00000467533 SACM1LQ9NTJ5 587 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 NDRG3Q9UGV2 375 aa9.46□□□□□ -0.9
HDAC3-203ENST00000467533 C15orf38-AP3S2A0A0A6YYH1 394 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 TCRBV16S1A1N1A0A5B0 115 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 MACROD2A1Z1Q3 448 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 A8MV72 311 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-203ENST00000467533 AHRRA9YTQ3 701 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 PRMT5O14744 637 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-203ENST00000467533 KPNA5O15131 536 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 CHST10O43529 356 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 PRKNO60260 465 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-203ENST00000467533 ZFAND5O76080 213 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 P04436 131 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 SLC35G6P0C7Q6 338 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 CTSSP25774 331 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 CTNNA2P26232 953 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 ADARP55265 1226 aaKnown RBP9.45□□□□□ -0.9
HDAC3-203ENST00000467533 ARHGAP19Q14CB8 494 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 HYAL4Q2M3T9 481 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 FASTKD1Q53R41 847 aaKnown RBP9.45□□□□□ -0.9
HDAC3-203ENST00000467533 LUZP2Q86TE4 346 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 ASPGQ86U10 573 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 SREK1Q8WXA9 508 aaKnown RBP9.45□□□□□ -0.9
HDAC3-203ENST00000467533 NCLNQ969V3 563 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 PANX2Q96RD6 677 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 RASL10BQ96S79 203 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 WDR83Q9BRX9 315 aaKnown RBP9.45□□□□□ -0.9
HDAC3-203ENST00000467533 ANP32EQ9BTT0 268 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 FAM114A2Q9NRY5 505 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 JKAMPQ9P055 326 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 ZNF223Q9UK11 482 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-203ENST00000467533 TESMINQ9Y4I5 508 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 HYOU1Q9Y4L1 999 aa9.45□□□□□ -0.9
HDAC3-203ENST00000467533 hCG_1818297A0A087WSY0 165 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 MROH6A6NGR9 719 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 MYO1CO00159 1063 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 WWP2O00308 870 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 SOX30O94993 753 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 HSD17B2P37059 387 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 TRPC1P48995 793 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 ATP5J2P56134 94 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 SKP1P63208 163 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 FOXO1Q12778 655 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 CAPRIN1Q14444 709 aaKnown RBP9.44□□□□□ -0.9
HDAC3-203ENST00000467533 HERC3Q15034 1050 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 XKR6Q5GH73 641 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 AARS2Q5JTZ9 985 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms