RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ZNF346Q9UL40 294 aaKnown RBP2.03□□□□□ -2.08
GTF3C3-209ENST00000466862 NOL7Q9UMY1 257 aaKnown RBP2.03□□□□□ -2.08
GTF3C3-209ENST00000466862 SNX8Q9Y5X2 465 aa2.03□□□□□ -2.08
GTF3C3-209ENST00000466862 RNF123Q5XPI4 1314 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 SALL1Q9NSC2 1324 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 TRBV5-4A0A0C4DH59 114 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 A0A0U1RQG5 324 aaPredicted RBP2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 hCG_1809904A0A1W2PP81 198 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 A0A1W2PPE2 198 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 A0A1W2PR64 198 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 H3BMM5 538 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 HAT1O14929 419 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 DNTTP04053 509 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 RPN1P04843 607 aaKnown RBP2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 ANPEPP15144 967 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 MC5RP33032 325 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 SFTPDP35247 375 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 COPB2P35606 906 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 MATKP42679 507 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 RIDAP52758 137 aaKnown RBP2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 ALCAMQ13740 583 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 PSMD6Q15008 389 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 C2orf83Q53S99 150 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 ARMC3Q5W041 872 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 PP632Q6XCG6 107 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 MCM10Q7L590 875 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 C5orf24Q7Z6I8 188 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 TLK2Q86UE8 772 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 VASH2Q86V25 355 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 TTC30BQ8N4P2 665 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 TEX26Q8N6G2 289 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 XXYLT1Q8NBI6 393 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 GTSF1Q8WW33 167 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 P2RX5Q93086 422 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 PYCR2Q96C36 320 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 NXPE2Q96DL1 559 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 NUS1Q96E22 293 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 STRADBQ9C0K7 418 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 IARS2Q9NSE4 1012 aaKnown RBP2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 POLKQ9UBT6 870 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 Q9UF83 564 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 RPS6KA6Q9UK32 745 aa2.02□□□□□ -2.09
GTF3C3-209ENST00000466862 TRBC2A0A5B9 178 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 TSPY2A6NKD2 308 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 LMO7DNF2Z398 122 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 HDAC3O15379 428 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 DKC1O60832 514 aaKnown RBP eCLIP2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 KBTBD11O94819 623 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 TSPY3P0CV98 308 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 TSPY8P0CW00 308 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 ATP6V1B1P15313 513 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 GIFP27352 417 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 BTG1P62324 171 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 TSPY1Q01534 308 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 BECN1Q14457 450 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 TMEM44Q2T9K0 475 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 LETM2Q2VYF4 491 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 RBPMS2Q6ZRY4 209 aaKnown RBP2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 Q6ZVQ6 151 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 KRT74Q7RTS7 529 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 LRRC49Q8IUZ0 686 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 GPATCH11Q8N954 259 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 CCDC191Q8NCU4 936 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 OR6T1Q8NGN1 323 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 SPSB1Q96BD6 273 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 BAG1Q99933 345 aaPredicted RBP2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 MGME1Q9BQP7 344 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 TXLNGYQ9BZA5 131 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 RIMS4Q9H426 269 aaPredicted RBP2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 SH3GLB2Q9NR46 395 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 DEPPQ9NTK1 212 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 CFDP1Q9UEE9 299 aaPredicted RBP2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 TRPV2Q9Y5S1 764 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 MAGED1Q9Y5V3 778 aaPredicted RBP2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 FAM169AQ9Y6X4 670 aa2.01□□□□□ -2.09
GTF3C3-209ENST00000466862 PSMD10O75832 226 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 IGHG3P01860 377 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 APOA4P06727 396 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 SUPT20HL2P0C7V6 817 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 NR2F1P10589 423 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 CD1DP15813 335 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 IL11P20809 199 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 FASP25445 335 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 NNMTP40261 264 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 SLC1A4P43007 532 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 CSE1LP55060 971 aaKnown RBP2□□□□□ -2.09
GTF3C3-209ENST00000466862 GCKRQ14397 625 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 GRB14Q14449 540 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 RASA2Q15283 850 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 LTB4RQ15722 352 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 RBBP7Q16576 425 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 PCK2Q16822 640 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 TIMM50Q3ZCQ8 353 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 C1QTNF12Q5T7M4 302 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 GPR139Q6DWJ6 353 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 DHRS11Q6UWP2 260 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 PLPPR4Q7Z2D5 763 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 ANKRD23Q86SG2 305 aa2□□□□□ -2.09
GTF3C3-209ENST00000466862 PRPF39Q86UA1 669 aaKnown RBP2□□□□□ -2.09
GTF3C3-209ENST00000466862 IQCHQ86VS3 1027 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms