RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 ARMC10Q8N2F6 343 aa17.61■□□□□ 0.41
SRSF4-202ENST00000466448 NT5CQ8TCD5 201 aa17.61■□□□□ 0.41
SRSF4-202ENST00000466448 UTP15Q8TED0 518 aaKnown RBP17.61■□□□□ 0.41
SRSF4-202ENST00000466448 ZFP69BQ9UJL9 534 aa17.61■□□□□ 0.41
SRSF4-202ENST00000466448 SETD2Q9BYW2 2564 aaPredicted RBP17.6■□□□□ 0.41
SRSF4-202ENST00000466448 A0A1B0GTH9 108 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 TCRBV16S1A1N1A0A5B0 115 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 TFECO14948 347 aaPredicted RBP17.6■□□□□ 0.41
SRSF4-202ENST00000466448 CCDC175P0C221 793 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 PGAM1P18669 254 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 SCTRP47872 440 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 MEOX1P50221 254 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 SPNS3Q6ZMD2 512 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 SULF2Q8IWU5 870 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 MARVELD2Q8N4S9 558 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 TBC1D19Q8N5T2 526 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 POGLUT1Q8NBL1 392 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 FAM57AQ8TBR7 257 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 NEIL2Q969S2 332 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 NECTIN3Q9NQS3 549 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 COQ3Q9NZJ6 369 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 KLF13Q9Y2Y9 288 aaPredicted RBP17.6■□□□□ 0.41
SRSF4-202ENST00000466448 HRH3Q9Y5N1 445 aa17.6■□□□□ 0.41
SRSF4-202ENST00000466448 A8MUA0 341 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 GOLGA6L6A8MZA4 724 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 FCHO1O14526 889 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 AHSGP02765 367 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 TPOP07202 933 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 PTGS2P35354 604 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 HNF4AP41235 474 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 PGGT1BP53609 377 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 AP1S2P56377 157 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 RAB8AP61006 207 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 CSHL1Q14406 222 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 CMPK2Q5EBM0 449 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 CCDC137Q6PK04 289 aaKnown RBP17.59■□□□□ 0.41
SRSF4-202ENST00000466448 CD163Q86VB7 1156 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 RASGEF1CQ8N431 466 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 ANKRD53Q8N9V6 530 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 APCDD1LQ8NCL9 501 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 SLC5A11Q8WWX8 675 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 FBXL8Q96CD0 374 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 MS4A14Q96JA4 679 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 TSNARE1Q96NA8 513 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 DEFB126Q9BYW3 111 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 SLC6A16Q9GZN6 736 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 CLK4Q9HAZ1 481 aaKnown RBP17.59■□□□□ 0.41
SRSF4-202ENST00000466448 PRDM9Q9NQV7 894 aa17.59■□□□□ 0.41
SRSF4-202ENST00000466448 PCNX1Q96RV3 2341 aa17.58■□□□□ 0.41
SRSF4-202ENST00000466448 PABPN1LA6NDY0 278 aaKnown RBP17.58■□□□□ 0.4
SRSF4-202ENST00000466448 C4orf51C9J302 202 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 KLRC4-KLRK1H3BQV0 150 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 PEX1O43933 1283 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 HS6ST1O60243 411 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 GUCA1CO95843 209 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 AHRP35869 848 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 IL2P60568 153 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 HYAL2Q12891 473 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 CYP1B1Q16678 543 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 CEP128Q6ZU80 1094 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 PPIL6Q8IXY8 311 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 RHBGQ9H310 441 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 KLHL31Q9H511 634 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 ZFATQ9P243 1243 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 SLC17A6Q9P2U8 582 aa17.58■□□□□ 0.4
SRSF4-202ENST00000466448 SCN3AQ9NY46 2000 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 TRBV11-1A0A0K0K1C0 115 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 PSMD12O00232 456 aaPredicted RBP17.57■□□□□ 0.4
SRSF4-202ENST00000466448 FANCGO15287 622 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 CDC40O60508 579 aaKnown RBP eCLIP17.57■□□□□ 0.41e-7■■■□□ 16.2
SRSF4-202ENST00000466448 KRT38O76015 456 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 RNH1P13489 461 aaKnown RBP17.57■□□□□ 0.4
SRSF4-202ENST00000466448 TFEBP19484 476 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 REEP5Q00765 189 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 PDAP1Q13442 181 aaKnown RBP17.57■□□□□ 0.4
SRSF4-202ENST00000466448 MDGA2Q7Z553 956 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 CNTN4Q8IWV2 1026 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 B3GNT7Q8NFL0 401 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 C16orf52Q8NHV5 167 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 ATL1Q8WXF7 558 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 TRIM54Q9BYV2 358 aa17.57■□□□□ 0.4
SRSF4-202ENST00000466448 BANF1O75531 89 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 ITGA10O75578 1167 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 ENO2P09104 434 aaPredicted RBP17.56■□□□□ 0.4
SRSF4-202ENST00000466448 SMIM10L1P0DMW3 83 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 IGFBP2P18065 325 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 CLCN2P51788 898 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 GPR85P60893 370 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 RNASEH2BQ5TBB1 312 aaKnown RBP17.56■□□□□ 0.4
SRSF4-202ENST00000466448 KIAA0408Q6ZU52 694 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 CYP4Z2PQ8N1L4 340 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 CA13Q8N1Q1 262 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 ZFP62Q8NB50 900 aaPredicted RBP17.56■□□□□ 0.4
SRSF4-202ENST00000466448 ARMC2Q8NEN0 867 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 TRPV3Q8NET8 790 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 GABPB2Q8TAK5 448 aaPredicted RBP17.56■□□□□ 0.4
SRSF4-202ENST00000466448 SMIM10Q96HG1 83 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 AICDAQ9GZX7 198 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 PELI2Q9HAT8 420 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 NPDC1Q9NQX5 325 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms