RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.68□□□□□ -0.06
SCAP-209ENST00000465628 CDC42EP4Q9H3Q1 356 aaKnown RBP14.68□□□□□ -0.06
SCAP-209ENST00000465628 DMGDHQ9UI17 866 aaKnown RBP14.68□□□□□ -0.06
SCAP-209ENST00000465628 PCDHGA10Q9Y5H3 936 aa14.68□□□□□ -0.06
SCAP-209ENST00000465628 COPG1Q9Y678 874 aaKnown RBP14.68□□□□□ -0.06
SCAP-209ENST00000465628 SCN2AQ99250 2005 aa14.68□□□□□ -0.06
SCAP-209ENST00000465628 A0A1W2PQ72 361 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 A8MUI8 341 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 TAPBPO15533 448 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 F10P00742 488 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 ITGAMP11215 1152 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 RNH1P13489 461 aaKnown RBP14.67□□□□□ -0.06
SCAP-209ENST00000465628 GSTM2P28161 218 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 TYK2P29597 1187 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 EFNA3P52797 238 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 OR4D2P58180 307 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 BTN3A2P78410 334 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 IRF9Q00978 393 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 EXT1Q16394 746 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 HIST2H2ACQ16777 129 aaPredicted RBP14.67□□□□□ -0.06
SCAP-209ENST00000465628 GLE1Q53GS7 698 aaKnown RBP14.67□□□□□ -0.06
SCAP-209ENST00000465628 SFT2D3Q587I9 215 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 HIST2H2AA3Q6FI13 130 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 PAPD4Q6PIY7 484 aaKnown RBP14.67□□□□□ -0.06
SCAP-209ENST00000465628 FAM26EQ8N5C1 309 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 CEP112Q8N8E3 955 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 ARMC2Q8NEN0 867 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 NXNL1Q96CM4 212 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 SNRNP40Q96DI7 357 aaKnown RBP14.67□□□□□ -0.06
SCAP-209ENST00000465628 C19orf60Q96EN9 201 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 PTCD3Q96EY7 689 aaKnown RBP14.67□□□□□ -0.06
SCAP-209ENST00000465628 UBXN10Q96LJ8 280 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 LPAR4Q99677 370 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 EFCAB11Q9BUY7 163 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 VPS11Q9H270 941 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 KLHL31Q9H511 634 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 ACSS3Q9H6R3 686 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 KCNK13Q9HB14 408 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 ASH1LQ9NR48 2969 aaKnown RBP14.67□□□□□ -0.06
SCAP-209ENST00000465628 AGPAT4Q9NRZ5 378 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 IGSF5Q9NSI5 407 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 ASF1BQ9NVP2 202 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 PLA2G3Q9NZ20 509 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 OPTCQ9UBM4 332 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 CNTRLQ7Z7A1 2325 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 SHANK1Q9Y566 2161 aa14.67□□□□□ -0.06
SCAP-209ENST00000465628 PRRC2CQ9Y520 2896 aaKnown RBP14.67□□□□□ -0.06
SCAP-209ENST00000465628 A0A096LPK6 155 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 B3GALT2O43825 422 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 PRMT3O60678 531 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 AGFG2O95081 481 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 PCNAP12004 261 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 ARL1P40616 181 aaPredicted RBP14.66□□□□□ -0.06
SCAP-209ENST00000465628 PLA2G16P53816 162 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 TAS2R50P59544 299 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 RHAGQ02094 409 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 TGM3Q08188 693 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 DLG1Q12959 904 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 CHIT1Q13231 466 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 MRPL49Q13405 166 aaKnown RBP14.66□□□□□ -0.06
SCAP-209ENST00000465628 LAPTM5Q13571 262 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 UBAP2LQ14157 1087 aaKnown RBP14.66□□□□□ -0.06
SCAP-209ENST00000465628 NR6A1Q15406 480 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 FHL5Q5TD97 284 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 B3GNTL1Q67FW5 361 aaPredicted RBP14.66□□□□□ -0.06
SCAP-209ENST00000465628 TRIM40Q6P9F5 258 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 FAM180AQ6UWF9 173 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 SUN3Q8TAQ9 357 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 UHMK1Q8TAS1 419 aaKnown RBP14.66□□□□□ -0.06
SCAP-209ENST00000465628 CREB3L4Q8TEY5 395 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 PTCHD1Q96NR3 888 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 LMF1Q96S06 567 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 CD244Q9BZW8 370 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 PITHD1Q9GZP4 211 aaPredicted RBP14.66□□□□□ -0.06
SCAP-209ENST00000465628 EHD1Q9H4M9 534 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 LANCL2Q9NS86 450 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 ABI3Q9P2A4 366 aa14.66□□□□□ -0.06
SCAP-209ENST00000465628 CPSF2Q9P2I0 782 aaKnown RBP14.66□□□□□ -0.06
SCAP-209ENST00000465628 PTBP2Q9UKA9 531 aaKnown RBP14.66□□□□□ -0.06
SCAP-209ENST00000465628 MAGEB17A8MXT2 336 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 TCP11X1B4DZS4 312 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 POC1B-GALNT4F8VUJ3 575 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 CLEC3AO75596 197 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 C2P06681 752 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 HNRNPH1P31943 449 aaKnown RBP14.65□□□□□ -0.06
SCAP-209ENST00000465628 SOX11P35716 441 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 GGT5P36269 586 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 MSH2P43246 934 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 DOC2AQ14183 400 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 UBAP2Q5T6F2 1119 aaKnown RBP14.65□□□□□ -0.06
SCAP-209ENST00000465628 PLAG1Q6DJT9 500 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 IGFL2Q6UWQ7 119 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 ISCA2Q86U28 154 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 CENPLQ8N0S6 344 aaPredicted RBP14.65□□□□□ -0.06
SCAP-209ENST00000465628 OR1N1Q8NGS0 311 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 SEC16BQ96JE7 1060 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 SCYL1Q96KG9 808 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 PAFAH2Q99487 392 aa14.65□□□□□ -0.06
SCAP-209ENST00000465628 REXO4Q9GZR2 422 aaKnown RBP14.65□□□□□ -0.06
SCAP-209ENST00000465628 FLNCQ14315 2725 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms