RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PRSS58Q8IYP2 241 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 TRPC4APQ8TEL6 797 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 GAL3ST3Q96A11 431 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 NACC2Q96BF6 587 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 L3HYPDHQ96EM0 354 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 FAR2Q96K12 515 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 ACSS2Q9NR19 701 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 C14orf105Q9NVL8 296 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 SENP1Q9P0U3 644 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 HCN3Q9P1Z3 774 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 MAN2B2Q9Y2E5 1009 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 TSC22D4Q9Y3Q8 395 aa13.74□□□□□ -0.21
SQSTM1-205ENST00000464493 ZFYVE26Q68DK2 2539 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 IGSF10Q6WRI0 2623 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 ZNF860A6NHJ4 632 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 ERVH48-1M5A8F1 160 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 ERI3O43414 337 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 BMP10O95393 424 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 TGFB1P01137 390 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 IGHEP01854 428 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 CCR10P46092 362 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 BTN3A2P78410 334 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 TRAF3Q13114 568 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 DDX39BQ13838 428 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 ZRSR2Q15696 482 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 TRIM40Q6P9F5 258 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 CHSY3Q70JA7 882 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 ZC3H7AQ8IWR0 971 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 SRFBP1Q8NEF9 429 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 ARMC2Q8NEN0 867 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 OR2L5Q8NG80 312 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 OR4F6Q8NGB9 312 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 OR5T3Q8NGG3 340 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 HUS1BQ8NHY5 278 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 APOBEC4Q8WW27 367 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 TTC9Q92623 222 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 ZBTB9Q96C00 473 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 CMTM7Q96FZ5 175 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 MAGEB10Q96LZ2 347 aaPredicted RBP13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 IP6K3Q96PC2 410 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 F2RL3Q96RI0 385 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 ARHGAP9Q9BRR9 750 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 CRB3Q9BUF7 120 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 MS4A8Q9BY19 250 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 CENPHQ9H3R5 247 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 CLK4Q9HAZ1 481 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 SEMA3GQ9NS98 782 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 OXSMQ9NWU1 459 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 MID2Q9UJV3 735 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 C3orf18Q9UK00 162 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 KCNMB2Q9Y691 235 aa13.73□□□□□ -0.21
SQSTM1-205ENST00000464493 A0A088AWK7 358 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 A0A0G2JN53 185 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 A0A1B0GTL3 188 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 C4orf51C9J302 202 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 PEX12O00623 359 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 CHST10O43529 356 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 DNAJB6O75190 326 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 MLYCDO95822 493 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 HEXBP07686 556 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 CREB1P16220 341 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 ZNF10P21506 573 aaPredicted RBP13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 IL10P22301 178 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 MMP11P24347 488 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 XCR1P46094 333 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 PLA2G16P53816 162 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 EMP2P54851 167 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 DNAJB13P59910 316 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 OLR1P78380 273 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 PHEXP78562 749 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 TGM3Q08188 693 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 LINC00303Q3SY05 128 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 GGTA1PQ4G0N0 100 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 TMEM35AQ53FP2 167 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 TTC19Q6DKK2 380 aaPredicted RBP13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 ABHD17CQ6PCB6 329 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 PPP1R32Q7Z5V6 425 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 SHISA5Q8N114 240 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 RNF175Q8N4F7 328 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 CCNYL1Q8N7R7 359 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 WDR20Q8TBZ3 569 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 TCP10LQ8TDR4 215 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 PEX11GQ96HA9 241 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 FAM111AQ96PZ2 611 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 UBL7Q96S82 380 aaPredicted RBP13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 MTERF1Q99551 399 aaKnown RBP13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 DMRT3Q9NQL9 472 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 PSD3Q9NYI0 1048 aa13.72□□□□□ -0.21
SQSTM1-205ENST00000464493 CACNA1GO43497 2377 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 PIEZO2Q9H5I5 2752 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 MAGEB17A8MXT2 336 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 IDSB3KWA1 339 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 FOXE1O00358 373 aaPredicted RBP13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 TYROBPO43914 113 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 SH3BGRLO75368 114 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 JRKO75564 520 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 PTX3P26022 381 aaPredicted RBP13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 NEK2P51955 445 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 NAGLUP54802 743 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 NAA20P61599 178 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms