RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CLEC7AQ9BXN2 247 aa3.56□□□□□ -1.84
CLK1-208ENST00000464454 OSBPL8Q9BZF1 889 aa3.56□□□□□ -1.84
CLK1-208ENST00000464454 SLC39A8Q9C0K1 460 aa3.56□□□□□ -1.84
CLK1-208ENST00000464454 NAPBQ9H115 298 aa3.56□□□□□ -1.84
CLK1-208ENST00000464454 PLCXD1Q9NUJ7 323 aa3.56□□□□□ -1.84
CLK1-208ENST00000464454 COMMD8Q9NX08 183 aa3.56□□□□□ -1.84
CLK1-208ENST00000464454 POMT2Q9UKY4 750 aa3.56□□□□□ -1.84
CLK1-208ENST00000464454 SATB2Q9UPW6 733 aa3.56□□□□□ -1.84
CLK1-208ENST00000464454 PPP1R3CQ9UQK1 317 aa3.56□□□□□ -1.84
CLK1-208ENST00000464454 EXOGQ9Y2C4 368 aaKnown RBP3.56□□□□□ -1.84
CLK1-208ENST00000464454 ZNF510Q9Y2H8 683 aa3.56□□□□□ -1.84
CLK1-208ENST00000464454 MYH15Q9Y2K3 1946 aa3.56□□□□□ -1.84
CLK1-208ENST00000464454 A0A087WZ39 114 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 NKX6-3A6NJ46 265 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 H0YIG0 161 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 MAGEC1O60732 1142 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 KERAO60938 352 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 CLN5O75503 358 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 ZNF821O75541 412 aaPredicted RBP3.55□□□□□ -1.84
CLK1-208ENST00000464454 SRD5A2P31213 254 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 SLC1A3P43003 542 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 TSFMP43897 325 aaKnown RBP3.55□□□□□ -1.84
CLK1-208ENST00000464454 SLC6A12P48065 614 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 ARF5P84085 180 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 GUCY2DQ02846 1103 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 SLC3A1Q07837 685 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 NPRL3Q12980 569 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 RPA4Q13156 261 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 GRB14Q14449 540 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 HLA-BQ31612 363 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 ATP1A1-AS1Q5TC04 95 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 PRAMEF8Q5VWM4 474 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 KCTD11Q693B1 232 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 TCEAL6Q6IPX3 200 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 SLC27A4Q6P1M0 643 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 SIGLEC15Q6ZMC9 328 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 TRMT11Q7Z4G4 463 aaKnown RBP3.55□□□□□ -1.84
CLK1-208ENST00000464454 PRSS42Q7Z5A4 293 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 ASPGQ86U10 573 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 ZNF444Q8N0Y2 327 aaPredicted RBP3.55□□□□□ -1.84
CLK1-208ENST00000464454 ZNF614Q8N883 585 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 SMYD1Q8NB12 490 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 RNF149Q8NC42 400 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 SAP25Q8TEE9 199 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 BCL2L2Q92843 193 aaPredicted RBP3.55□□□□□ -1.84
CLK1-208ENST00000464454 CASP10Q92851 521 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 ATP6V0A1Q93050 837 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 RFT1Q96AA3 541 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 CFAP36Q96G28 342 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 C5orf30Q96GV9 206 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 C2orf48Q96LS8 159 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 SYT15Q9BQS2 421 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 ACPTQ9BZG2 426 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 GFRA4Q9GZZ7 299 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 PNPLA3Q9NST1 481 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 MIS18AQ9NYP9 233 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 TMED7Q9Y3B3 224 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 KNSTRNQ9Y448 316 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 ANGPTL3Q9Y5C1 460 aa3.55□□□□□ -1.84
CLK1-208ENST00000464454 RNF123Q5XPI4 1314 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 A0A1W2PR80 420 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 DDX39AO00148 427 aaKnown RBP3.54□□□□□ -1.84
CLK1-208ENST00000464454 NXPH2O95156 264 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 HMOX1P09601 288 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 SBK2P0C263 348 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 CPA3P15088 417 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 CTNNA2P26232 953 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 CLCN4P51793 760 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 ADARP55265 1226 aaKnown RBP3.54□□□□□ -1.84
CLK1-208ENST00000464454 MAPK11Q15759 364 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 STXBP2Q15833 593 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 LRRC37A5PQ49AS3 106 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 FAM106AQ4KMX7 169 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 IFI44LQ53G44 452 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 BSPRYQ5W0U4 402 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 FBXL22Q6P050 247 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 TMEM126BQ8IUX1 230 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 ZC3H3Q8IXZ2 948 aaKnown RBP3.54□□□□□ -1.84
CLK1-208ENST00000464454 THEM5Q8N1Q8 247 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 TEX26Q8N6G2 289 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 NAT8LQ8N9F0 302 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 ST7LQ8TDW4 575 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 CHURC1Q8WUH1 139 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 SEPT8Q92599 483 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 GGHQ92820 318 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 POM121L2Q96KW2 1035 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 KRT12Q99456 494 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 ACAT2Q9BWD1 397 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 HOXD1Q9GZZ0 328 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 MAGEF1Q9HAY2 307 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 TMEM181Q9P2C4 612 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 MAD2L2Q9UI95 211 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 PRSS21Q9Y6M0 314 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 RNF215Q9Y6U7 377 aa3.54□□□□□ -1.84
CLK1-208ENST00000464454 SNED1Q8TER0 1413 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 IGLV7-46A0A075B6I9 117 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 hCG_38984A0A1B0GV85 526 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 CCDC162PA2VCL2 907 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 ZNF732B4DXR9 585 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms