RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 KALRNO60229 2985 aa16.13■□□□□ 0.17
VPS52-215ENST00000464425 E2F3O00716 465 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 SOCS6O14544 535 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 DYNC1I1O14576 645 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 TM9SF1O15321 606 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 DNAJB6O75190 326 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 SIX3O95343 332 aaPredicted RBP16.12■□□□□ 0.17
VPS52-215ENST00000464425 SERPINA6P08185 405 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 CPA3P15088 417 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 EPB42P16452 691 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 ALOX12P18054 663 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 CD22P20273 847 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 NR1D1P20393 614 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 IMPDH1P20839 514 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 PIK3CGP48736 1102 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 EMP2P54851 167 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 RRADP55042 308 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 RAB8AP61006 207 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 MAGOHP61326 146 aaKnown RBP16.12■□□□□ 0.17
VPS52-215ENST00000464425 HERVK_113P63132 956 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 HYAL2Q12891 473 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 DEFB134Q4QY38 66 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 TOR1AIP1Q5JTV8 583 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 FAAH2Q6GMR7 532 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 ADNP2Q6IQ32 1131 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 KIRREL2Q6UWL6 708 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 ABHD13Q7L211 337 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 ZC3H7AQ8IWR0 971 aaKnown RBP16.12■□□□□ 0.17
VPS52-215ENST00000464425 AFAP1L2Q8N4X5 818 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 OR5T3Q8NGG3 340 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 UTP15Q8TED0 518 aaKnown RBP16.12■□□□□ 0.17
VPS52-215ENST00000464425 ARL8AQ96BM9 186 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 WDR34Q96EX3 536 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 ATP6V1G3Q96LB4 118 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 FER1L6-AS2Q96M78 137 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 ERVK-6Q9BXR3 956 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 TGIF2Q9GZN2 237 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 SLC6A16Q9GZN6 736 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 C12orf65Q9H3J6 166 aaKnown RBP16.12■□□□□ 0.17
VPS52-215ENST00000464425 NT5DC2Q9H857 520 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 PRM3Q9NNZ6 103 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 SLC17A7Q9P2U7 560 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 COPG2Q9UBF2 871 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 FBXL4Q9UKA2 621 aa16.12■□□□□ 0.17
VPS52-215ENST00000464425 ANKDD1BA6NHY2 528 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 IDSB3KWA1 339 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 GALR3O60755 368 aaPredicted RBP16.11■□□□□ 0.17
VPS52-215ENST00000464425 ALOX12BO75342 701 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 JRKO75564 520 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 ZWINTO95229 277 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 BMP10O95393 424 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 IGHEP01854 428 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 HEXBP07686 556 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 EEF1DP29692 281 aaKnown RBP16.11■□□□□ 0.17
VPS52-215ENST00000464425 ETV4P43268 484 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 XCR1P46094 333 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 DNAJB13P59910 316 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 NAA20P61599 178 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 OLR1P78380 273 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 C19orf57Q0VDD7 668 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 LAPTM5Q13571 262 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 RAPSNQ13702 412 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 E2F2Q14209 437 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 TBCCQ15814 346 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 HIST2H2ACQ16777 129 aaPredicted RBP16.11■□□□□ 0.17
VPS52-215ENST00000464425 PAGE2BQ5JRK9 111 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 DCAF10Q5QP82 559 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 MFSD4BQ5TF39 518 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 HIST2H2AA3Q6FI13 130 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 PTRH1Q86Y79 214 aaKnown RBP16.11■□□□□ 0.17
VPS52-215ENST00000464425 CCDC63Q8NA47 563 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 ARMC2Q8NEN0 867 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 TTLQ8NG68 377 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 C8orf44Q96CB5 159 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 L3HYPDHQ96EM0 354 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 FAM111AQ96PZ2 611 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 EFCAB11Q9BUY7 163 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 SLC25A23Q9BV35 468 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 PITHD1Q9GZP4 211 aaPredicted RBP16.11■□□□□ 0.17
VPS52-215ENST00000464425 AICDAQ9GZX7 198 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 C14orf105Q9NVL8 296 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 OXSMQ9NWU1 459 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 TP53TG5Q9Y2B4 290 aa16.11■□□□□ 0.17
VPS52-215ENST00000464425 SPTA1P02549 2419 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 TLN1Q9Y490 2541 aaKnown RBP16.1■□□□□ 0.17
VPS52-215ENST00000464425 COL6A6A6NMZ7 2263 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 LRIT2A6NDA9 550 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 OR2W5A6NFC9 320 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 URADA6NGE7 173 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 HMGB1P1B2RPK0 211 aaPredicted RBP16.1■□□□□ 0.17
VPS52-215ENST00000464425 WFS1O76024 890 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 RPS17P08708 135 aaKnown RBP16.1■□□□□ 0.17
VPS52-215ENST00000464425 CASP2P42575 452 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 GTF2H2Q13888 395 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 MINDY4Q4G0A6 757 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 LACTB2Q53H82 288 aaPredicted RBP16.1■□□□□ 0.17
VPS52-215ENST00000464425 ZNF678Q5SXM1 525 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 GTF2H2CQ6P1K8 395 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 VN1R5Q7Z5H4 357 aa16.1■□□□□ 0.17
VPS52-215ENST00000464425 MYLK4Q86YV6 388 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms