RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 CYP7B1O75881 506 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SEMA3DO95025 777 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 ITGB1P05556 798 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 C8GP07360 202 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TSPAN19P0C672 248 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 HSMCR30P0CW71 290 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 ENGP17813 658 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 POLR2CP19387 275 aaPredicted RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 MAPK9P45984 424 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 IDH2P48735 452 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SLC9A3P48764 834 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 GZMKP49863 264 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 HTR6P50406 440 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 CLCN7P51798 805 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 HK3P52790 923 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 LIMK1P53667 647 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SNRPGP62308 76 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 YBX1P67809 324 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 PSPHP78330 225 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 GALK2Q01415 458 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TAGLNQ01995 201 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 HSPA14Q0VDF9 509 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SMARCB1Q12824 385 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 MLLT11Q13015 90 aaPredicted RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SP140Q13342 867 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 PPIGQ13427 754 aaKnown RBP eCLIP6.92□□□□□ -1.31e-6■□□□□ 11.3
CLSTN1-204ENST00000464286 KCNC3Q14003 757 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 MED22Q15528 200 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 CARTPTQ16568 116 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TSTQ16762 297 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 MICAQ29983 383 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TMEM44Q2T9K0 475 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 ZDHHC20Q5W0Z9 365 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TRIM40Q6P9F5 258 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SBSNQ6UWP8 590 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 FAM131AQ6UXB0 335 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 CEP68Q76N32 757 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 GET4Q7L5D6 327 aaPredicted RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 LUZP2Q86TE4 346 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 DDX53Q86TM3 631 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 BBS7Q8IWZ6 715 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 ZBTB2Q8N680 514 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 GALNT11Q8NCW6 608 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 OR4A15Q8NGL6 344 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 WDR36Q8NI36 951 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 HCAR2Q8TDS4 363 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 GEMIN6Q8WXD5 167 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TMEM80Q96HE8 168 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 ZNF419Q96HQ0 510 aaPredicted RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TEFMQ96QE5 360 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 ARPC5LQ9BPX5 153 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 ALOXE3Q9BYJ1 711 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 PRRG3Q9BZD7 231 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 ARHGAP39Q9C0H5 1083 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SRRQ9GZT4 340 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 P2RY12Q9H244 342 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 RANBP3Q9H6Z4 567 aaPredicted RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 GOLGA2P5Q9HBQ8 144 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 EXOSC4Q9NPD3 245 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SERHLQ9NQF3 203 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 FAM105AQ9NUU6 356 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 KCTD5Q9NXV2 234 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 FLRT1Q9NZU1 646 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SH3BP4Q9P0V3 963 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TBC1D24Q9ULP9 559 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TMCC3Q9ULS5 477 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 ABCG2Q9UNQ0 655 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TMA7Q9Y2S6 64 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SLC45A1Q9Y2W3 748 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SPEF1Q9Y4P9 236 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 KCTD3Q9Y597 815 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 A0A1W2PQH9 124 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 C17orf102A2RUQ5 167 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 OR6C70A6NIJ9 312 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 A8MU76 341 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 FZD9O00144 591 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 ARVCFO00192 962 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 CCL22O00626 93 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 TFECO14948 347 aaPredicted RBP6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 MYL12BO14950 172 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 GPR182O15218 404 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 PRKYO43930 277 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 SLC19A2O60779 497 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 ZNF780AO75290 641 aaPredicted RBP6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 SLC43A1O75387 559 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 CLDN11O75508 207 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 SERPINI2O75830 405 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 OR2B3O76000 313 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 KCNK5O95279 499 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 ADAP00813 363 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 PDGFAP04085 211 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 STSP08842 583 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 GAAP10253 952 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 HAPLN1P10915 354 aaPredicted RBP6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 MYCLP1P12525 358 aaPredicted RBP6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 COX7A2P14406 83 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 HOXB9P17482 250 aaPredicted RBP6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 HTR2BP41595 481 aa6.91□□□□□ -1.3
CLSTN1-204ENST00000464286 HSPA7P48741 367 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms