RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TUBBP07437 444 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 KRT15P19012 456 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 CRHR1P34998 444 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 XCR1P46094 333 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 UNC50Q53HI1 259 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 DCAF10Q5QP82 559 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 MED27Q6P2C8 311 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 ABHD17CQ6PCB6 329 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 TMEM205Q6UW68 189 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 ABHD13Q7L211 337 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 IQCKQ8N0W5 287 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 RNF175Q8N4F7 328 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 TMEM102Q8N9M5 508 aaPredicted RBP16.71■□□□□ 0.27
VPS52-214ENST00000463486 OR11G2Q8NGC1 345 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 GAL3ST3Q96A11 431 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 ABHD17AQ96GS6 310 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 F2RL3Q96RI0 385 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 ARHGAP9Q9BRR9 750 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 MS4A8Q9BY19 250 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 VN1R1Q9GZP7 353 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 C12orf65Q9H3J6 166 aaKnown RBP16.71■□□□□ 0.27
VPS52-214ENST00000463486 CLK4Q9HAZ1 481 aaKnown RBP16.71■□□□□ 0.27
VPS52-214ENST00000463486 PRDM7Q9NQW5 492 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 ACSS2Q9NR19 701 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 TLDC2A0PJX2 215 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 ANKDD1BA6NHY2 528 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 PLIN3O60664 434 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 IGHEP01854 428 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 KRT4P19013 534 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 ATP5F1P24539 256 aaPredicted RBP16.7■□□□□ 0.26
VPS52-214ENST00000463486 PIK3CGP48736 1102 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 PRKAA2P54646 552 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 EMP2P54851 167 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 SOX8P57073 446 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 STXBP1P61764 594 aaKnown RBP16.7■□□□□ 0.26
VPS52-214ENST00000463486 HERVK_113P63132 956 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 OLR1P78380 273 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 RUNX2Q13950 521 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 HIST2H2ACQ16777 129 aaPredicted RBP16.7■□□□□ 0.26
VPS52-214ENST00000463486 ZNF678Q5SXM1 525 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 HIST2H2AA3Q6FI13 130 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 TRABD2AQ86V40 505 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 RIBC1Q8N443 379 aaPredicted RBP16.7■□□□□ 0.26
VPS52-214ENST00000463486 AMER2Q8N7J2 671 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 OR2L5Q8NG80 312 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 WDR20Q8TBZ3 569 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 UBE2E3Q969T4 207 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 CDK15Q96Q40 435 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 TMEM237Q96Q45 408 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 YIPF2Q9BWQ6 316 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 ERVK-6Q9BXR3 956 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 ACTR8Q9H981 624 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 PLAAQ9Y263 795 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 ANGPTL3Q9Y5C1 460 aa16.7■□□□□ 0.26
VPS52-214ENST00000463486 LOC102723996A0A087X1L8 192 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 URADA6NGE7 173 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 ERI3O43414 337 aaKnown RBP16.69■□□□□ 0.26
VPS52-214ENST00000463486 GLRA3O75311 464 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 PDGFAP04085 211 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 IMPDH1P20839 514 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 IL10P22301 178 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 PIK3CBP42338 1070 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 CDH13P55290 713 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 BTN3A2P78410 334 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 RHAGQ02094 409 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 ZNF844Q08AG5 666 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 FAM219BQ5XKK7 198 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 NIPAL1Q6NVV3 410 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 C4orf33Q8N1A6 199 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 CA13Q8N1Q1 262 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 ZNF843Q8N446 348 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 BANPQ8N9N5 519 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 HUS1BQ8NHY5 278 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 C8orf44Q96CB5 159 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 PEX11GQ96HA9 241 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 OR1F2PQ96R84 312 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 REXO4Q9GZR2 422 aaKnown RBP16.69■□□□□ 0.26
VPS52-214ENST00000463486 FBXL4Q9UKA2 621 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 MKL2Q9ULH7 1088 aa16.69■□□□□ 0.26
VPS52-214ENST00000463486 NUP210LQ5VU65 1888 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 A0A0G2JN53 185 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 CLDN9O95484 217 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 COX6A1P12074 109 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 TSPAN8P19075 237 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 SERPINB1P30740 379 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 CCT5P48643 541 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 CCL11P51671 97 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 PLA2G16P53816 162 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 RRADP55042 308 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 Q0VFX4 171 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 ZRSR2Q15696 482 aaKnown RBP16.68■□□□□ 0.26
VPS52-214ENST00000463486 RBBP7Q16576 425 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 CPSF6Q16630 551 aaKnown RBP eCLIP16.68■□□□□ 0.26
VPS52-214ENST00000463486 DEPDC1Q5TB30 811 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 ZYG11AQ6WRX3 759 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 CCT6BQ92526 530 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 TBC1D20Q96BZ9 403 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 L3HYPDHQ96EM0 354 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 SLC25A18Q9H1K4 315 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 SEMA4BQ9NPR2 832 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms