RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 RNF187Q5TA31 235 aaPredicted RBP14.67□□□□□ -0.06
SND1-203ENST00000463020 ANKRD22Q5VYY1 191 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 KIAA0930Q6ICG6 404 aaPredicted RBP14.67□□□□□ -0.06
SND1-203ENST00000463020 UBE2R2Q712K3 238 aaPredicted RBP14.67□□□□□ -0.06
SND1-203ENST00000463020 MDGA2Q7Z553 956 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 SDCCAG8Q86SQ7 713 aaPredicted RBP14.67□□□□□ -0.06
SND1-203ENST00000463020 ASPGQ86U10 573 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 KLHL7Q8IXQ5 586 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 MMP21Q8N119 569 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 AGGF1Q8N302 714 aaeCLIP14.67□□□□□ -0.06
SND1-203ENST00000463020 AFAP1L2Q8N4X5 818 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 NFAM1Q8NET5 270 aaPredicted RBP14.67□□□□□ -0.06
SND1-203ENST00000463020 OR52N2Q8NGI0 321 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 TCF12Q99081 682 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 GPR21Q99679 349 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 EBNA1BP2Q99848 306 aaKnown RBP14.67□□□□□ -0.06
SND1-203ENST00000463020 ATG10Q9H0Y0 220 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 SPNS1Q9H2V7 528 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 LIME1Q9H400 295 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 UTP6Q9NYH9 597 aaKnown RBP14.67□□□□□ -0.06
SND1-203ENST00000463020 BFARQ9NZS9 450 aa14.67□□□□□ -0.06
SND1-203ENST00000463020 INTS1Q8N201 2190 aaKnown RBP14.67□□□□□ -0.06
SND1-203ENST00000463020 AKAP6Q13023 2319 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 PINLYPA6NC86 204 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 C4orf51C9J302 202 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 B4GALT2O60909 372 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 FHP07954 510 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 MPC1LP0DKB6 136 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 CD1EP15812 388 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 TFEBP19484 476 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 IST1P53990 364 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 GUCY2DQ02846 1103 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 ZNF470Q6ECI4 717 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 CAPN13Q6MZZ7 669 aaPredicted RBP14.66□□□□□ -0.06
SND1-203ENST00000463020 NEPROQ6NW34 567 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 C16orf47Q6ZP98 133 aaPredicted RBP14.66□□□□□ -0.06
SND1-203ENST00000463020 DMRTC2Q8IXT2 367 aaPredicted RBP14.66□□□□□ -0.06
SND1-203ENST00000463020 LGI4Q8N135 537 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 LILRB4Q8NHJ6 448 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 SLC13A3Q8WWT9 602 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 CCDC177Q9NQR7 707 aaPredicted RBP14.66□□□□□ -0.06
SND1-203ENST00000463020 DEPPQ9NTK1 212 aa14.66□□□□□ -0.06
SND1-203ENST00000463020 ZNF223Q9UK11 482 aaPredicted RBP14.66□□□□□ -0.06
SND1-203ENST00000463020 FLNAP21333 2647 aaKnown RBP14.66□□□□□ -0.06
SND1-203ENST00000463020 A0A0G2JMM0 328 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 A0A1W2PPB8 328 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 A0A1W2PRS3 328 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 ZNF839A8K0R7 811 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 A8MUA0 341 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 KIR3DP1A8MWS1 328 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 H3BQF6 201 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 TFECO14948 347 aaPredicted RBP14.65□□□□□ -0.06
SND1-203ENST00000463020 CHST10O43529 356 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 GALR3O60755 368 aaPredicted RBP14.65□□□□□ -0.06
SND1-203ENST00000463020 TRHRP34981 398 aaPredicted RBP14.65□□□□□ -0.06
SND1-203ENST00000463020 SLC1A2P43004 574 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 CYB561P49447 251 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 HLCSP50747 726 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 PGGT1BP53609 377 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 NUP107P57740 925 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 TAS2R50P59544 299 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 MPP1Q00013 466 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 HYAL2Q12891 473 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 SNTB1Q13884 538 aaKnown RBP14.65□□□□□ -0.06
SND1-203ENST00000463020 TRIP13Q15645 432 aaPredicted RBP14.65□□□□□ -0.06
SND1-203ENST00000463020 DEFB134Q4QY38 66 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 SEL1L2Q5TEA6 688 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 CAND1Q86VP6 1230 aaKnown RBP14.65□□□□□ -0.06
SND1-203ENST00000463020 TMEM200AQ86VY9 491 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 CYP4X1Q8N118 509 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 MFSD9Q8NBP5 474 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 FAM98AQ8NCA5 519 aaKnown RBP14.65□□□□□ -0.06
SND1-203ENST00000463020 CAMKVQ8NCB2 501 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 MCOLN3Q8TDD5 553 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 IFT81Q8WYA0 676 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 ALKBH8Q96BT7 664 aaKnown RBP14.65□□□□□ -0.06
SND1-203ENST00000463020 SEC16BQ96JE7 1060 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 OR1F2PQ96R84 312 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 FRMD8P1Q9BZ68 369 aaPredicted RBP14.65□□□□□ -0.06
SND1-203ENST00000463020 AICDAQ9GZX7 198 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 GSX1Q9H4S2 264 aaPredicted RBP14.65□□□□□ -0.06
SND1-203ENST00000463020 NECTIN3Q9NQS3 549 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 COQ3Q9NZJ6 369 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 PDE10AQ9Y233 779 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 SLC22A7Q9Y694 548 aa14.65□□□□□ -0.06
SND1-203ENST00000463020 IGKV3D-11A0A0A0MRZ8 115 aa14.64□□□□□ -0.07
SND1-203ENST00000463020 SAGE2PA6NJ88 616 aa14.64□□□□□ -0.07
SND1-203ENST00000463020 RAD51CO43502 376 aa14.64□□□□□ -0.07
SND1-203ENST00000463020 PEX1O43933 1283 aa14.64□□□□□ -0.07
SND1-203ENST00000463020 PRKNO60260 465 aaPredicted RBP14.64□□□□□ -0.07
SND1-203ENST00000463020 ZNF888P0CJ79 500 aaPredicted RBP14.64□□□□□ -0.07
SND1-203ENST00000463020 CD99P14209 185 aa14.64□□□□□ -0.07
SND1-203ENST00000463020 PHKG1Q16816 387 aa14.64□□□□□ -0.07
SND1-203ENST00000463020 GSPT2Q8IYD1 628 aaKnown RBP14.64□□□□□ -0.07
SND1-203ENST00000463020 HORMAD2Q8N7B1 307 aa14.64□□□□□ -0.07
SND1-203ENST00000463020 APCDD1LQ8NCL9 501 aa14.64□□□□□ -0.07
SND1-203ENST00000463020 SREK1Q8WXA9 508 aaKnown RBP14.64□□□□□ -0.07
SND1-203ENST00000463020 TBC1D20Q96BZ9 403 aa14.64□□□□□ -0.07
SND1-203ENST00000463020 RUNDC3BQ96NL0 473 aa14.64□□□□□ -0.07
SND1-203ENST00000463020 OR4K3Q96R72 315 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms