RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 COX15Q7KZN9 410 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 VASH2Q86V25 355 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 OR2L5Q8NG80 312 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 SELENOMQ8WWX9 145 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 DPH1Q9BZG8 443 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 OR51B5Q9H339 312 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 EML4Q9HC35 981 aaKnown RBP11.19□□□□□ -0.62
CPNE1-221ENST00000462352 FARSBQ9NSD9 589 aaKnown RBP11.19□□□□□ -0.62
CPNE1-221ENST00000462352 PSD3Q9NYI0 1048 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 IFT80Q9P2H3 777 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-221ENST00000462352 CROTQ9UKG9 612 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 PPT2Q9UMR5 302 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 NAALAD2Q9Y3Q0 740 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 FER1L5A0AVI2 2057 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 ACACBO00763 2458 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 SEC16AO15027 2179 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 A0A0G2JN53 185 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 ZNF860A6NHJ4 632 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 TMEM114B3SHH9 223 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 C21orf140B9A014 251 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 C9J4A7 227 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 H0YIG0 161 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 SGK494L7N484 410 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 SAP18O00422 153 aaKnown RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 TERTO14746 1132 aaKnown RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 AZIN1O14977 448 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 RRP8O43159 456 aaKnown RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 ITM2AO43736 263 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 GALR3O60755 368 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 ULK1O75385 1050 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 RDH16O75452 317 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 CRCPO75575 148 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 LYPLA1O75608 230 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 ETHE1O95571 254 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 UROSP10746 265 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 PIM1P11309 404 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 LIFP15018 202 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 CHN1P15882 459 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 FBLP22087 321 aaKnown RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 F8A1P23610 371 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 GRK2P25098 689 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 PTX3P26022 381 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 HTR6P50406 440 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 PLA2G16P53816 162 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 SKP1P63208 163 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 BTN3A2P78410 334 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 MAT1AQ00266 395 aaKnown RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 SRSF6Q13247 344 aaKnown RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 DNASE1L3Q13609 305 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 DSG2Q14126 1118 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 TMEM35AQ53FP2 167 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 HSP90B2PQ58FF3 399 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 MLIPQ5VWP3 458 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 CLEC6AQ6EIG7 209 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 NIPAL1Q6NVV3 410 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 MRPL14Q6P1L8 145 aaKnown RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 TRIM40Q6P9F5 258 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 ABHD17CQ6PCB6 329 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 UBE3DQ7Z6J8 389 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 SPACA3Q8IXA5 215 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 AMER3Q8N944 861 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 SRFBP1Q8NEF9 429 aaKnown RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 COL26A1Q96A83 441 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 KIAA1143Q96AT1 154 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 FAR2Q96K12 515 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 HBEGFQ99075 208 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 C17orf62Q9BQA9 187 aa11.18□□□□□ -0.62
CPNE1-221ENST00000462352 GPN2Q9H9Y4 310 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-221ENST00000462352 CELSR3Q9NYQ7 3312 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 ZFHX4Q86UP3 3567 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 RTCAO00442 366 aaKnown RBP11.17□□□□□ -0.62
CPNE1-221ENST00000462352 CNOT3O75175 753 aaKnown RBP11.17□□□□□ -0.62
CPNE1-221ENST00000462352 HSPA4LO95757 839 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 ALBP02768 609 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 FGF4P08620 206 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 RAB40ALP0C0E4 278 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 NR1D1P20393 614 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 SERPINB3P29508 390 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 SLC1A6P48664 564 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 ABCE1P61221 599 aaKnown RBP11.17□□□□□ -0.62
CPNE1-221ENST00000462352 RPS15P62841 145 aaKnown RBP11.17□□□□□ -0.62
CPNE1-221ENST00000462352 ZNF33BQ06732 778 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 TGM3Q08188 693 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 BST1Q10588 318 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 STX3Q13277 289 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 CUL3Q13618 768 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 ABRAXAS2Q15018 415 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 NCF4Q15080 339 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 SYT16Q17RD7 645 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 SH2D4BQ5SQS7 431 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 KANK2Q63ZY3 851 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 LRRC69Q6ZNQ3 347 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 OVCH1Q7RTY7 1134 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 SHISA5Q8N114 240 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 ENDOVQ8N8Q3 282 aaKnown RBP11.17□□□□□ -0.62
CPNE1-221ENST00000462352 OR5T3Q8NGG3 340 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 FKBP10Q96AY3 582 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 RGMAQ96B86 450 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 CNTNAP3BQ96NU0 1288 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms