RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 FPGTO14772 594 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 SPTLC2O15270 562 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 B4GAT1O43505 415 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 SNAP91O60641 907 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 ZMPSTE24O75844 475 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 SORBS2O94875 1100 aaKnown RBP4.68□□□□□ -1.66
COPS3-204ENST00000462236 CD160O95971 181 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 NR3C1P04150 777 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 HEXAP06865 529 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 TRIM49P0CI25 452 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 TRIM49CP0CI26 452 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 VDRP11473 427 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 NR1D1P20393 614 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 TNFAIP3P21580 790 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 RRM1P23921 792 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 CHMP24386 653 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 CASP1P29466 404 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 GTF2H1P32780 548 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 MAN1A1P33908 653 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 GCLMP48507 274 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 NUMBP49757 651 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 PEX5P50542 639 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 VAMP7P51809 220 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 SLC8A3P57103 927 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 PITX1P78337 314 aaPredicted RBP4.68□□□□□ -1.66
COPS3-204ENST00000462236 PPARDQ03181 441 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 STK4Q13043 487 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 ELOCQ15369 112 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 TAF11Q15544 211 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 CLPPQ16740 277 aaPredicted RBP4.68□□□□□ -1.66
COPS3-204ENST00000462236 SYPL2Q5VXT5 272 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 KCTD16Q68DU8 428 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 HMBOX1Q6NT76 420 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 FBXL22Q6P050 247 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 C22orf39Q6P5X5 142 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 R3HCC1LQ7Z5L2 792 aaKnown RBP4.68□□□□□ -1.66
COPS3-204ENST00000462236 C1QL2Q7Z5L3 287 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 SFTPA2Q8IWL1 248 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 ZNF683Q8IZ20 524 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 SIX6OS1Q8N1H7 587 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 PLD5Q8N7P1 536 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 PDILTQ8N807 584 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 BMPERQ8N8U9 685 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 LRRC57Q8N9N7 239 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 TEX45Q8NA69 505 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 UBA3Q8TBC4 463 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 APOBEC4Q8WW27 367 aaKnown RBP4.68□□□□□ -1.66
COPS3-204ENST00000462236 RNF183Q96D59 192 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 DDA1Q9BW61 102 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 MAGEF1Q9HAY2 307 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 POT1Q9NUX5 634 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 IL36AQ9UHA7 158 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 GPR34Q9UPC5 381 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 TMEM184BQ9Y519 407 aaPredicted RBP4.68□□□□□ -1.66
COPS3-204ENST00000462236 STAB1Q9NY15 2570 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 MPDZO75970 2070 aa4.68□□□□□ -1.66
COPS3-204ENST00000462236 HCFC1P51610 2035 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 IGLV5-39A0A0G2JS06 123 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 TEX13CA0A0J9YWL9 993 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 IGHV5-10-1A0A0J9YXX1 117 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 CXorf51AA0A1B0GTR3 108 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 WDR91A4D1P6 747 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 HMGB1P1B2RPK0 211 aaPredicted RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 F5H5T6 163 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 I6L893 689 aaPredicted RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 NUDT21O43809 227 aaKnown RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 RAD1O60671 282 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 CPNE6O95741 557 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 TRUB2O95900 331 aaKnown RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 MOCS2O96007 188 aaPredicted RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 HOXB5P09067 269 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 ALPIP09923 528 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 UBL4AP11441 157 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 SLC2A4P14672 509 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 ZNF18P17022 549 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 CTPS1P17812 591 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 TTKP33981 857 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 RYKP34925 604 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 RFC1P35251 1148 aaPredicted RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 CPOXP36551 454 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 RGS7P49802 495 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 LIMK2P53671 638 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 GEMIN4P57678 1058 aaKnown RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 TRA2AQ13595 282 aaKnown RBP eCLIP4.67□□□□□ -1.66
COPS3-204ENST00000462236 KLF9Q13886 244 aaPredicted RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 GSTA3Q16772 222 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 HIST2H2ACQ16777 129 aaPredicted RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 ALG11Q2TAA5 492 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 ACCSLQ4AC99 568 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 KRT39Q6A163 491 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 FAM173BQ6P4H8 233 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 C1orf122Q6ZSJ8 110 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 INTS8Q75QN2 995 aaKnown RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 TIPARPQ7Z3E1 657 aaKnown RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 PATL1Q86TB9 770 aaKnown RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 GKN2Q86XP6 184 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 CCDC13Q8IYE1 715 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 SLC34A3Q8N130 599 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 HORMAD2Q8N7B1 307 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 ATP6V0D2Q8N8Y2 350 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms