RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 CLDN9O95484 217 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 HSPA4LO95757 839 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 ENO1P06733 434 aaKnown RBP14.82□□□□□ -0.04
SDF4-204ENST00000459994 CHRNGP07510 517 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 FGF4P08620 206 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 CDH1P12830 882 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 OTX2P32243 289 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 HNF4AP41235 474 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 CSNK1G2P78368 415 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 SRSF1Q07955 248 aaKnown RBP eCLIP14.82□□□□□ -0.04
SDF4-204ENST00000459994 LAPTM5Q13571 262 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 RAPSNQ13702 412 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 DOC2AQ14183 400 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 TUBB8Q3ZCM7 444 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 GGTA1PQ4G0N0 100 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 XKR6Q5GH73 641 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 CATSPEREQ5SY80 951 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 FRMPD2BQ6IN97 320 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 MRPL14Q6P1L8 145 aaKnown RBP14.82□□□□□ -0.04
SDF4-204ENST00000459994 COX15Q7KZN9 410 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 TMPRSS11BQ86T26 416 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 CUZD1Q86UP6 607 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 MCATQ8IVS2 390 aaKnown RBP14.82□□□□□ -0.04
SDF4-204ENST00000459994 KIRREL3Q8IZU9 778 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 OR4F6Q8NGB9 312 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 PTCD3Q96EY7 689 aaKnown RBP14.82□□□□□ -0.04
SDF4-204ENST00000459994 C7orf26Q96N11 449 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 SORT1Q99523 831 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 PLCD4Q9BRC7 762 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 DPH7Q9BTV6 452 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 EFCAB11Q9BUY7 163 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 SLC25A23Q9BV35 468 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 ILKAPQ9H0C8 392 aaPredicted RBP14.82□□□□□ -0.04
SDF4-204ENST00000459994 NT5DC2Q9H857 520 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 ACTR8Q9H981 624 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 MID1IP1Q9NPA3 183 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 CUEDC1Q9NWM3 386 aaPredicted RBP14.82□□□□□ -0.04
SDF4-204ENST00000459994 IRAK4Q9NWZ3 460 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 TRPS1Q9UHF7 1281 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 ZNF225Q9UK10 706 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 PTRH2Q9Y3E5 179 aaKnown RBP14.82□□□□□ -0.04
SDF4-204ENST00000459994 RAP2CQ9Y3L5 183 aa14.82□□□□□ -0.04
SDF4-204ENST00000459994 OR2A25A4D2G3 310 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 H7BY64 318 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 LYPLA1O75608 230 aaPredicted RBP14.81□□□□□ -0.04
SDF4-204ENST00000459994 UMODP07911 640 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 HBQ1P09105 142 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 AGXTP21549 392 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 CXCR2P25025 360 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 GYS2P54840 703 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 PAGE2BQ5JRK9 111 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 GRHL2Q6ISB3 625 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 TTLL10Q6ZVT0 673 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 PAQR7Q86WK9 346 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 METTL27Q8N6F8 245 aaPredicted RBP14.81□□□□□ -0.04
SDF4-204ENST00000459994 TEX19Q8NA77 164 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 UBE2E3Q969T4 207 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 MIB2Q96AX9 1013 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 PRAP1Q96NZ9 151 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 AIF1LQ9BQI0 150 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 MESP1Q9BRJ9 268 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 SARGQ9BW04 601 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 SLC29A3Q9BZD2 475 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 C20orf27Q9GZN8 174 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 ZNF395Q9H8N7 513 aaPredicted RBP14.81□□□□□ -0.04
SDF4-204ENST00000459994 LUZP4Q9P127 313 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 RNF11Q9Y3C5 154 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 AP1M2Q9Y6Q5 423 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 SCN3AQ9NY46 2000 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 COL12A1Q99715 3063 aa14.81□□□□□ -0.04
SDF4-204ENST00000459994 KCNE1BA0A087WTH5 132 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 LOC105369274A0A096LPK9 316 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 LOC102723532A0A0G2JNH3 316 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 A0A1B0GTL3 188 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 C9J4A7 227 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 ALOX12BO75342 701 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 OR4F21O95013 312 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 CD22P20273 847 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 VARSP26640 1264 aaKnown RBP14.8□□□□□ -0.04
SDF4-204ENST00000459994 GRK3P35626 688 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 DCDP81605 110 aaKnown RBP14.8□□□□□ -0.04
SDF4-204ENST00000459994 REEP5Q00765 189 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 HIST2H2ACQ16777 129 aaPredicted RBP14.8□□□□□ -0.04
SDF4-204ENST00000459994 NKAIN1Q4KMZ8 207 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 PRR30Q53SZ7 412 aaPredicted RBP14.8□□□□□ -0.04
SDF4-204ENST00000459994 HIST2H2AA3Q6FI13 130 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 LETMD1Q6P1Q0 360 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 TLDC1Q6P9B6 456 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 MRGPREQ86SM8 312 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 OR4N4Q8N0Y3 316 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 KRT78Q8N1N4 520 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 PROKR1Q8TCW9 393 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 CDK15Q96Q40 435 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 DPH2Q9BQC3 489 aaPredicted RBP14.8□□□□□ -0.04
SDF4-204ENST00000459994 IFT80Q9P2H3 777 aaPredicted RBP14.8□□□□□ -0.04
SDF4-204ENST00000459994 TSC22D4Q9Y3Q8 395 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 TRAF6Q9Y4K3 522 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 PCDHGA9Q9Y5G4 932 aaKnown RBP14.8□□□□□ -0.04
SDF4-204ENST00000459994 SCN2AQ99250 2005 aa14.8□□□□□ -0.04
SDF4-204ENST00000459994 A0A0J9YVX5 310 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms