RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 SMIM10Q96HG1 83 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 CENPKQ9BS16 269 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 REXO4Q9GZR2 422 aaKnown RBP15.27■□□□□ 0.04
CD28-203ENST00000458610 ZNF71Q9NQZ8 489 aaPredicted RBP15.27■□□□□ 0.04
CD28-203ENST00000458610 C5AR2Q9P296 337 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 TSC22D4Q9Y3Q8 395 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 NSG1A0A0A6YYJ2 146 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 A6NL46 340 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 E2F3O00716 465 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 ERI3O43414 337 aaKnown RBP15.26■□□□□ 0.03
CD28-203ENST00000458610 B3GALT2O43825 422 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 PRAMEF4O60810 478 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 SHBGP04278 402 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 NUDT17P0C025 328 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 PCNAP12004 261 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 RNH1P13489 461 aaKnown RBP15.26■□□□□ 0.03
CD28-203ENST00000458610 ARL1P40616 181 aaPredicted RBP15.26■□□□□ 0.03
CD28-203ENST00000458610 PIK3CBP42338 1070 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 SLCO1A2P46721 670 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 CCNG1P51959 295 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 FOXL2P58012 376 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 MYBPC3Q14896 1274 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 ERCC6LQ2NKX8 1250 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 ADPRMQ3LIE5 342 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 C10orf62Q5T681 223 aaPredicted RBP15.26■□□□□ 0.03
CD28-203ENST00000458610 PRAMEF9Q5VWM5 478 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 ZNF605Q86T29 641 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 SLC22A9Q8IVM8 553 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 PLPP5Q8NEB5 264 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 OR7G3Q8NG95 312 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 ADAMTS18Q8TE60 1221 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 AENQ8WTP8 325 aaKnown RBP15.26■□□□□ 0.03
CD28-203ENST00000458610 TM9SF4Q92544 642 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 CAVIN3Q969G5 261 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 CCDC126Q96EE4 140 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 CMTM7Q96FZ5 175 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 PEX11GQ96HA9 241 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 TBCDQ9BTW9 1192 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 PARD6BQ9BYG5 372 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 ROPN1BQ9BZX4 212 aaPredicted RBP15.26■□□□□ 0.03
CD28-203ENST00000458610 KLHL31Q9H511 634 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 NOL11Q9H8H0 719 aaKnown RBP15.26■□□□□ 0.03
CD28-203ENST00000458610 COPS7BQ9H9Q2 264 aaPredicted RBP15.26■□□□□ 0.03
CD28-203ENST00000458610 ROPN1Q9HAT0 212 aaPredicted RBP15.26■□□□□ 0.03
CD28-203ENST00000458610 MLXIPLQ9NP71 852 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 RIC8BQ9NVN3 520 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 TMEM216Q9P0N5 145 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 ANAPC2Q9UJX6 822 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 GRID1Q9ULK0 1009 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 TP53TG5Q9Y2B4 290 aa15.26■□□□□ 0.03
CD28-203ENST00000458610 FER1L5A0AVI2 2057 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 LOC102723996A0A087X1L8 192 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 A0A1W2PQ72 361 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 ZNF860A6NHJ4 632 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 H0YIV9 168 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 GOLGA8RI6L899 631 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 GLRA3O75311 464 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 SIX3O95343 332 aaPredicted RBP15.25■□□□□ 0.03
CD28-203ENST00000458610 FHP07954 510 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 CD22P20273 847 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 ITGA3P26006 1051 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 PTX3P26022 381 aaPredicted RBP15.25■□□□□ 0.03
CD28-203ENST00000458610 MTTPP55157 894 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 KLRB1Q12918 225 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 VWA5B1Q5TIE3 1220 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 TMEM205Q6UW68 189 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 L3MBTL4Q8NA19 623 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 TEX19Q8NA77 164 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 C7orf57Q8NEG2 295 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 ARMC2Q8NEN0 867 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 FDCSPQ8NFU4 85 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 ZNF473Q8WTR7 871 aaKnown RBP15.25■□□□□ 0.03
CD28-203ENST00000458610 KCNC2Q96PR1 638 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 SERINC2Q96SA4 455 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 NTMT1Q9BV86 223 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 VN1R1Q9GZP7 353 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 PSD3Q9NYI0 1048 aa15.25■□□□□ 0.03
CD28-203ENST00000458610 TLDC2A0PJX2 215 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 SYNDIG1LA6NDD5 238 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 SMIM23A6NLE4 172 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 MAGEB17A8MXT2 336 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 CLDN4O14493 209 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 DPM1O60762 260 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 C1QL1O75973 258 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 OTCP00480 354 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 ATP5F1P24539 256 aaPredicted RBP15.24■□□□□ 0.03
CD28-203ENST00000458610 ARFIP1P53367 373 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 PLA2G16P53816 162 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 NAA20P61599 178 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 HERVK_113P63132 956 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 ACTN3Q08043 901 aaPredicted RBP15.24■□□□□ 0.03
CD28-203ENST00000458610 NSDHLQ15738 373 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 AP5B1Q2VPB7 878 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 CCDC153Q494R4 210 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 FAAH2Q6GMR7 532 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 ABHD17CQ6PCB6 329 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 CPEB2Q7Z5Q1 589 aaKnown RBP15.24■□□□□ 0.03
CD28-203ENST00000458610 MILR1Q7Z6M3 343 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 PARP9Q8IXQ6 854 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 KBTBD2Q8IY47 623 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms