RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 CSRP3P50461 194 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 Q0VFX4 171 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 LAPTM5Q13571 262 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 ABRAXAS2Q15018 415 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 SETDB1Q15047 1291 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 TSNAXIP1Q2TAA8 658 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 KBTBD2Q8IY47 623 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 CYP4X1Q8N118 509 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 AFAP1L2Q8N4X5 818 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 SIRT6Q8N6T7 355 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 ATP6V1E2Q96A05 226 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 GAL3ST3Q96A11 431 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 TBC1D20Q96BZ9 403 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 GPR78Q96P69 363 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 SMAD5Q99717 465 aaKnown RBP17.63■□□□□ 0.41
USP39-209ENST00000458268 AICDAQ9GZX7 198 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 ACTR8Q9H981 624 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 ZBTB20Q9HC78 741 aaPredicted RBP17.63■□□□□ 0.41
USP39-209ENST00000458268 MLXIPLQ9NP71 852 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 SLAMF7Q9NQ25 335 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 RIC8BQ9NVN3 520 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 IGHV1-45A0A0A0MS14 117 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 SAP18O00422 153 aaKnown RBP17.62■□□□□ 0.41
USP39-209ENST00000458268 KLHL41O60662 606 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 RBP1P09455 135 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 GCAP28676 217 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 CD97P48960 835 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 ALDH18A1P54886 795 aaKnown RBP17.62■□□□□ 0.41
USP39-209ENST00000458268 ACTN3Q08043 901 aaPredicted RBP17.62■□□□□ 0.41
USP39-209ENST00000458268 PCOLCEQ15113 449 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 NSDHLQ15738 373 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 IGFBP7Q16270 282 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 AGAP7PQ5VUJ5 663 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 MED27Q6P2C8 311 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 TRIM40Q6P9F5 258 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 RNF175Q8N4F7 328 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 ZADH2Q8N4Q0 377 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 AGAP4Q96P64 663 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 F2RL3Q96RI0 385 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 CCDC77Q9BR77 488 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 REXO4Q9GZR2 422 aaKnown RBP17.62■□□□□ 0.41
USP39-209ENST00000458268 EHD1Q9H4M9 534 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 PTGFRNQ9P2B2 879 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 PSMC3IPQ9P2W1 217 aaPredicted RBP17.62■□□□□ 0.41
USP39-209ENST00000458268 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.62■□□□□ 0.41
USP39-209ENST00000458268 ZNF490Q9ULM2 529 aaPredicted RBP17.62■□□□□ 0.41
USP39-209ENST00000458268 PCDHGB7Q9Y5F8 929 aa17.62■□□□□ 0.41
USP39-209ENST00000458268 V9GYY5 206 aaPredicted RBP17.62■□□□□ 0.41
USP39-209ENST00000458268 IQANK1A0A1B0GTG1 560 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 FAM227AF5H4B4 570 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 CLEC3AO75596 197 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 WFS1O76024 890 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 F10P00742 488 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 RNH1P13489 461 aaKnown RBP17.61■□□□□ 0.41
USP39-209ENST00000458268 JAK1P23458 1154 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 CERS1P27544 350 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 MAGEA12P43365 314 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 SLCO1A2P46721 670 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 GTF2H2Q13888 395 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 BTBD16Q32M84 506 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 SFT2D3Q587I9 215 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 SLC6A19Q695T7 634 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 NIPAL1Q6NVV3 410 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 JMJD6Q6NYC1 403 aaPredicted RBP17.61■□□□□ 0.41
USP39-209ENST00000458268 GTF2H2CQ6P1K8 395 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 GOLGA7Q7Z5G4 137 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 VN1R5Q7Z5H4 357 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 CPEB2Q7Z5Q1 589 aaKnown RBP17.61■□□□□ 0.41
USP39-209ENST00000458268 ANKRD37Q7Z713 158 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 CA13Q8N1Q1 262 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 RBMXL3Q8N7X1 1067 aaKnown RBP17.61■□□□□ 0.41
USP39-209ENST00000458268 BRIX1Q8TDN6 353 aaKnown RBP17.61■□□□□ 0.41
USP39-209ENST00000458268 TM9SF4Q92544 642 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 MS4A6EQ96DS6 147 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 PTCHD1Q96NR3 888 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 ILKAPQ9H0C8 392 aaPredicted RBP17.61■□□□□ 0.41
USP39-209ENST00000458268 EPS8L2Q9H6S3 715 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 NT5DC2Q9H857 520 aa17.61■□□□□ 0.41
USP39-209ENST00000458268 GCN1Q92616 2671 aaKnown RBP17.6■□□□□ 0.41
USP39-209ENST00000458268 A0A088AWK7 358 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 LRIT2A6NDA9 550 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 A8MUA0 341 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 RTCAO00442 366 aaKnown RBP17.6■□□□□ 0.41
USP39-209ENST00000458268 B3GALT2O43825 422 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 TGFB1P01137 390 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 PRR35P0CG20 571 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 ITGAMP11215 1152 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 ZNF10P21506 573 aaPredicted RBP17.6■□□□□ 0.41
USP39-209ENST00000458268 PIK3CGP48736 1102 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 OR4D2P58180 307 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 BTG2P78543 158 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 NAA30Q147X3 362 aaPredicted RBP17.6■□□□□ 0.41
USP39-209ENST00000458268 PRR30Q53SZ7 412 aaPredicted RBP17.6■□□□□ 0.41
USP39-209ENST00000458268 ADGRD1Q6QNK2 874 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 TMEM205Q6UW68 189 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 RPS27LQ71UM5 84 aaKnown RBP17.6■□□□□ 0.41
USP39-209ENST00000458268 EFCAB3Q8N7B9 438 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 FAM47BQ8NA70 645 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 OR2L5Q8NG80 312 aa17.6■□□□□ 0.41
USP39-209ENST00000458268 UBE2E3Q969T4 207 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms