RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 ADAMTS17Q8TE56 1095 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 UTP15Q8TED0 518 aaKnown RBP9.55□□□□□ -0.88
RFX3-210ENST00000457373 PPP4R1Q8TF05 950 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 APOBEC4Q8WW27 367 aaKnown RBP9.55□□□□□ -0.88
RFX3-210ENST00000457373 THAP4Q8WY91 577 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 UBE2E3Q969T4 207 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 ZBTB9Q96C00 473 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 NSUN5Q96P11 429 aaKnown RBP9.55□□□□□ -0.88
RFX3-210ENST00000457373 BBC3Q96PG8 261 aaPredicted RBP9.55□□□□□ -0.88
RFX3-210ENST00000457373 CRB3Q9BUF7 120 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 PITHD1Q9GZP4 211 aaPredicted RBP9.55□□□□□ -0.88
RFX3-210ENST00000457373 AICDAQ9GZX7 198 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 C12orf65Q9H3J6 166 aaKnown RBP9.55□□□□□ -0.88
RFX3-210ENST00000457373 WDR54Q9H977 334 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 MKKSQ9NPJ1 570 aaPredicted RBP9.55□□□□□ -0.88
RFX3-210ENST00000457373 SEMA4BQ9NPR2 832 aaPredicted RBP9.55□□□□□ -0.88
RFX3-210ENST00000457373 ACSS2Q9NR19 701 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 COPG2Q9UBF2 871 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 NXT1Q9UKK6 140 aaKnown RBP9.55□□□□□ -0.88
RFX3-210ENST00000457373 GRID1Q9ULK0 1009 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 RNF11Q9Y3C5 154 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 KCNMB2Q9Y691 235 aa9.55□□□□□ -0.88
RFX3-210ENST00000457373 FRYQ5TBA9 3013 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 PCSK5Q92824 1860 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 C4orf51C9J302 202 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 MASP2O00187 686 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 PEX12O00623 359 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 OR7A17O14581 309 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 ATXN7O15265 892 aaPredicted RBP9.54□□□□□ -0.88
RFX3-210ENST00000457373 DLX3O60479 287 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 GALR3O60755 368 aaPredicted RBP9.54□□□□□ -0.88
RFX3-210ENST00000457373 JRKO75564 520 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 CLEC3AO75596 197 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 SUPT7LO94864 414 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 TGFB1P01137 390 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 IGHEP01854 428 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 HEXBP07686 556 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 RPS17P08708 135 aaKnown RBP9.54□□□□□ -0.88
RFX3-210ENST00000457373 FAM87AP0C7U9 286 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 SMIM10L1P0DMW3 83 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 KRT4P19013 534 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 ATP5F1P24539 256 aaPredicted RBP9.54□□□□□ -0.88
RFX3-210ENST00000457373 GSTM2P28161 218 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 HNRNPH1P31943 449 aaKnown RBP9.54□□□□□ -0.88
RFX3-210ENST00000457373 CCL11P51671 97 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 CCNG1P51959 295 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 EMP2P54851 167 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 POLE2P56282 527 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 BTN3A2P78410 334 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 ATP1A4Q13733 1029 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 E2F2Q14209 437 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 RBBP7Q16576 425 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 CPSF6Q16630 551 aaKnown RBP eCLIP9.54□□□□□ -0.88
RFX3-210ENST00000457373 UNC50Q53HI1 259 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 LIPJQ5W064 366 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 FAAH2Q6GMR7 532 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 GRHL2Q6ISB3 625 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 VN1R5Q7Z5H4 357 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 RNF175Q8N4F7 328 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 AFAP1L2Q8N4X5 818 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 EXD3Q8N9H8 876 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 ZNF473Q8WTR7 871 aaKnown RBP9.54□□□□□ -0.88
RFX3-210ENST00000457373 MTFMTQ96DP5 389 aaKnown RBP9.54□□□□□ -0.88
RFX3-210ENST00000457373 MS4A6EQ96DS6 147 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 PEX11GQ96HA9 241 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 SMIM10Q96HG1 83 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 FAR2Q96K12 515 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 F2RL3Q96RI0 385 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 TRIM55Q9BYV6 548 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 RHBGQ9H310 441 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 ZBTB26Q9HCK0 441 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 RRAGDQ9NQL2 400 aaPredicted RBP9.54□□□□□ -0.88
RFX3-210ENST00000457373 C14orf105Q9NVL8 296 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 C3orf18Q9UK00 162 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 PCTPQ9UKL6 214 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 EMCNQ9ULC0 261 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 ASPMQ8IZT6 3477 aa9.54□□□□□ -0.88
RFX3-210ENST00000457373 USP24Q9UPU5 2620 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 NUP210LQ5VU65 1888 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 IGLV3-12A0A075B6K2 115 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 LRIT2A6NDA9 550 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 EIF4E1BA6NMX2 242 aaKnown RBP9.53□□□□□ -0.88
RFX3-210ENST00000457373 IDSB3KWA1 339 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 PPP6CO00743 305 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 ERI3O43414 337 aaKnown RBP9.53□□□□□ -0.88
RFX3-210ENST00000457373 CHST10O43529 356 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 SPAG7O75391 227 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 ERLIN1O75477 346 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 DNAJB5O75953 348 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 BMP10O95393 424 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 CLDN9O95484 217 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 TBX6O95947 436 aaPredicted RBP9.53□□□□□ -0.88
RFX3-210ENST00000457373 PROCP04070 461 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 MYL2P10916 166 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 IMPDH1P20839 514 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 MMP11P24347 488 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 CRHR1P34998 444 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 XCR1P46094 333 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 PLA2G16P53816 162 aa9.53□□□□□ -0.88
RFX3-210ENST00000457373 CLCQ05315 142 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms