RNA–Protein interactions for RNA: ENST00000457054.6

PDCD6IP-206, Transcript of programmed cell death 6 interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDCD6IP, Length 5,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-206ENST00000457054 ERVFC1P60507 584 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 LSM3P62310 102 aaKnown RBP11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 SHC2P98077 582 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 HMGCS1Q01581 520 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 SLC18A2Q05940 514 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 RING1Q06587 406 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 LASP1Q14847 261 aaKnown RBP11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 GXYLT1Q4G148 440 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 MFSD6LQ8IWD5 586 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 CCDC116Q8IYX3 515 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 DENND2DQ9H6A0 471 aaPredicted RBP11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 PREBQ9HCU5 417 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 ARL8BQ9NVJ2 186 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 FBXO9Q9UK97 447 aaPredicted RBP11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 SLC6A14Q9UN76 642 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 WDR45Q9Y484 360 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 TMEM184BQ9Y519 407 aaPredicted RBP11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 PCDHGB2Q9Y5G2 931 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 BAZ2BQ9UIF8 2168 aaKnown RBP11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 EFCAB9A8MZ26 197 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 ZNF879B4DU55 563 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 SIGLEC6O43699 453 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 FOXD2O60548 495 aaPredicted RBP11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 HSD3B2P26439 372 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 SLAMF1Q13291 335 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 KCNC3Q14003 757 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 NKAPLQ5M9Q1 402 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 C3orf33Q6P1S2 294 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 GRAMD2AQ8IUY3 354 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 KBTBD8Q8NFY9 601 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 OR10A6Q8NH74 314 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 FIBINQ8TAL6 211 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 C7orf43Q8WVR3 580 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 TMEM184CQ9NVA4 438 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 SCRG1O75711 98 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 EDN1P05305 212 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 IL1RNP18510 177 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 EDNRAP25101 427 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 OR12D2P58182 307 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 ARPC4P59998 168 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 WDR60Q8WVS4 1066 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 C1orf74Q96LT6 269 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 DOHHQ9BU89 302 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 SOX17Q9H6I2 414 aaPredicted RBP11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 POLE3Q9NRF9 147 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 GHRLQ9UBU3 117 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 ZNF222Q9UK12 451 aa11.04□□□□□ -0.64
PDCD6IP-206ENST00000457054 RCCD1A6NED2 376 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 ACTL6BO94805 426 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 KDM4BO94953 1096 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 METTL18O95568 372 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 F11P03951 625 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 FUT2Q10981 343 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 ODF4Q2M2E3 257 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 EEF1A1P5Q5VTE0 462 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 LCTLQ6UWM7 567 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 CLVS1Q8IUQ0 354 aaPredicted RBP11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 POC5Q8NA72 575 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 COPS4Q9BT78 406 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 SLC40A1Q9NP59 571 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 PDP2Q9P2J9 529 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 FZD4Q9ULV1 537 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 KCTD3Q9Y597 815 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 XRN1Q8IZH2 1706 aaKnown RBP11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 K7ERQ8 282 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 RCBTB2O95199 551 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 TPOP07202 933 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 ACPPP15309 386 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 BCAP31P51572 246 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 EEFSECP57772 596 aaKnown RBP11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 SOX4Q06945 474 aaPredicted RBP11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 KHDC1LQ5JSQ8 128 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 SLC35F5Q8WV83 523 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 NXPE2Q96DL1 559 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 PCYT2Q99447 389 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 MFRPQ9BY79 579 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 MTG2Q9H4K7 406 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 NUP50Q9UKX7 468 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 BOKQ9UMX3 212 aaPredicted RBP11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 PLEKHA6Q9Y2H5 1048 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 L7N2F9 121 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 DFNA5O60443 496 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 ZBTB11O95625 1053 aaPredicted RBP11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 TP53P04637 393 aaPredicted RBP11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 BPGMP07738 259 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 GJA4P35212 333 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 SNU13P55769 128 aaKnown RBP11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 VAMP2P63027 116 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 IL18R1Q13478 541 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 QPCTQ16769 361 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 VHLLQ6RSH7 139 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 LARP4Q71RC2 724 aaKnown RBP eCLIP11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 JAGN1Q8N5M9 183 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 ANKK1Q8NFD2 765 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 OR5T2Q8NGG2 359 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 LRRC4CQ9HCJ2 640 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 DNMT3BQ9UBC3 853 aaKnown RBP11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 ATXN7L1Q9ULK2 861 aaPredicted RBP11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 GRIP1Q9Y3R0 1128 aa11.03□□□□□ -0.64
PDCD6IP-206ENST00000457054 PCDHB14Q9Y5E9 798 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms