RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 MMP25Q9NPA2 562 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 ABI3Q9P2A4 366 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 NTNG1Q9Y2I2 539 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 SYNDIG1LA6NDD5 238 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 OR5H15A6NDH6 313 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 CDK2AP1O14519 115 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 CLEC3AO75596 197 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 CDC123O75794 336 aaPredicted RBP16.81■□□□□ 0.28
MSH6-207ENST00000456246 CELA2AP08217 269 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 EDN3P14138 238 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 PHBP35232 272 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 TAS2R50P59544 299 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 RAB8AP61006 207 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 HYAL2Q12891 473 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 OR4D1Q15615 310 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 PDK4Q16654 411 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 EIF2S3LQ2VIR3 472 aaKnown RBP16.81■□□□□ 0.28
MSH6-207ENST00000456246 SFT2D3Q587I9 215 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 PAGE2BQ5JRK9 111 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 TOR1AIP1Q5JTV8 583 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 H3F3CQ6NXT2 135 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 LRRC70Q7Z2Q7 622 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.81■□□□□ 0.28
MSH6-207ENST00000456246 LGI4Q8N135 537 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 SPATA6LQ8N4H0 392 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 ARMC2Q8NEN0 867 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 OR1N1Q8NGS0 311 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 PRR7Q8TB68 274 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 ADAMTS18Q8TE60 1221 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 WDR34Q96EX3 536 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 PTCD3Q96EY7 689 aaKnown RBP16.81■□□□□ 0.28
MSH6-207ENST00000456246 FAR2Q96K12 515 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 PSMG3-AS1Q96PY0 264 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 NPLQ9BXD5 320 aaPredicted RBP16.81■□□□□ 0.28
MSH6-207ENST00000456246 UNKQ9C0B0 810 aaKnown RBP16.81■□□□□ 0.28
MSH6-207ENST00000456246 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.81■□□□□ 0.281e-8■■■■□ 21.4
MSH6-207ENST00000456246 KCNK13Q9HB14 408 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 NUDT4Q9NZJ9 180 aa16.81■□□□□ 0.28
MSH6-207ENST00000456246 MTRF1LQ9UGC7 380 aaKnown RBP16.81■□□□□ 0.28
MSH6-207ENST00000456246 PTBP2Q9UKA9 531 aaKnown RBP16.81■□□□□ 0.28
MSH6-207ENST00000456246 MAST4O15021 2626 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 IGHV3-20A0A0C4DH32 117 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 BLACEA4D250 179 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 ANKDD1BA6NHY2 528 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 TAPBPO15533 448 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 PRMT3O60678 531 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 WDPCPO95876 746 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 TUBB4AP04350 444 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 SLC35E2BP0CK96 405 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 HNF4AP41235 474 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 HSPA7P48741 367 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 OR4D2P58180 307 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 SLC7A5Q01650 507 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 ZNF33BQ06732 778 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 LAPTM5Q13571 262 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 TRADDQ15628 312 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 C18orf21Q32NC0 220 aaPredicted RBP16.8■□□□□ 0.28
MSH6-207ENST00000456246 SLC5A8Q8N695 610 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 SNX31Q8N9S9 440 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 CATSPER1Q8NEC5 780 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 MNS1Q8NEH6 495 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 LRRC1Q9BTT6 524 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 ZDHHC18Q9NUE0 388 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 STMN3Q9NZ72 180 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 MMACHCQ9Y4U1 282 aa16.8■□□□□ 0.28
MSH6-207ENST00000456246 DOPEY1Q5JWR5 2465 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 ESYT3A0FGR9 886 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 SYCE1LA8MT33 242 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 A8MUI8 341 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 B4GALT2O60909 372 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 KERAO60938 352 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 LTA4HP09960 611 aaKnown RBP16.79■□□□□ 0.28
MSH6-207ENST00000456246 TFEBP19484 476 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 OLR1P78380 273 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 TGM3Q08188 693 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 TBCCQ15814 346 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 HIST2H2ACQ16777 129 aaPredicted RBP16.79■□□□□ 0.28
MSH6-207ENST00000456246 MEP1AQ16819 746 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 XKR6Q5GH73 641 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 ACER2Q5QJU3 275 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 HIST2H2AA3Q6FI13 130 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 TRIM40Q6P9F5 258 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 CMC1Q7Z7K0 106 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 RELL1Q8IUW5 271 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 CCT6BQ92526 530 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 TSLPQ969D9 159 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 PTCHD1Q96NR3 888 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 CD244Q9BZW8 370 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 ALG9Q9H6U8 611 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 PRDM9Q9NQV7 894 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 OLAHQ9NV23 265 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 PLA2G3Q9NZ20 509 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 SLC5A6Q9Y289 635 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 ACOT9Q9Y305 439 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 PCDHGB6Q9Y5F9 930 aa16.79■□□□□ 0.28
MSH6-207ENST00000456246 A0A087X1B8 175 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 CTAGE15A4D2H0 777 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 LRIT2A6NDA9 550 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 OR2W5A6NFC9 320 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 KIF2AO00139 706 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms