RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 APMAPQ9HDC9 416 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 QSER1Q2KHR3 1735 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TTLL13PA6NNM8 815 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 IMPA2O14732 288 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF20P17024 532 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 SPP2Q13103 211 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 SF3A2Q15428 464 aaKnown RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 MTURNQ8N3F0 131 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 SEMA6DQ8NFY4 1073 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TRNT1Q96Q11 434 aaKnown RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 KXD1Q9BQD3 176 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PCDH12Q9NPG4 1184 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 BTRCQ9Y297 605 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ETV7Q9Y603 341 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM131Q92545 1883 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CHURC1-FNTBB4DL54 471 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 IL1AP01583 271 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ALDH2P05091 517 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 AKR1A1P14550 325 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 DNASE1P24855 282 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 EPHA3P29320 983 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 LYRM7Q5U5X0 104 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 FAM205BPQ63HN1 556 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 LCN8Q6JVE9 175 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 SLC22A25Q6T423 547 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 SLC35F5Q8WV83 523 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 C7orf43Q8WVR3 580 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CNOT9Q92600 299 aaKnown RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 HSD17B14Q9BPX1 270 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ZDHHC5Q9C0B5 715 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 FAM212BQ9NTI7 297 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF142P52746 1687 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 LOC100130705A0A1B0GUX0 176 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ANKRD65E5RJM6 399 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ITM2AO43736 263 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 AMHP03971 560 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ACPPP15309 386 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 HERV-K104P61576 105 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 FAPQ12884 760 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 MAD2L1BPQ15013 274 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PGM5Q15124 567 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CRB2Q5IJ48 1285 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 UFSP2Q9NUQ7 469 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 COG5Q9UP83 839 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 SMIM35A0A1B0GVV1 85 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ARPC2O15144 300 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ADAM12O43184 909 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 FARS2O95363 451 aaKnown RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ADAP00813 363 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 MLLT3P42568 568 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 EFEMP1Q12805 493 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 HSDL1Q3SXM5 330 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 OR5T1Q8NG75 326 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 OVCA2Q8WZ82 227 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 GPR22Q99680 433 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 KCNS3Q9BQ31 491 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 RNF38Q9H0F5 515 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 SDCBP2Q9H190 292 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PRDM12Q9H4Q4 367 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CWH43Q9H720 699 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ERVK-5Q9HDB9 667 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 AGRNO00468 2067 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ANKRD33BA6NCL7 494 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 FTCDNL1E5RQL4 147 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MATN3O15232 486 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 TBX1O43435 398 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 RAD51DO75771 328 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 EBLN1P0CF75 366 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CD53P19397 219 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 GALK1P51570 392 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 PROSER3Q2NL68 480 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 BTBD16Q32M84 506 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ZMAT1Q5H9K5 638 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 HIST2H3PS2Q5TEC6 136 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SLC6A19Q695T7 634 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF704Q6ZNC4 412 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CMIPQ8IY22 773 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SIX5Q8N196 739 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 KCNRGQ8N5I3 272 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ZBTB2Q8N680 514 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 TXNDC5Q8NBS9 432 aaKnown RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CAMKVQ8NCB2 501 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 DPF2Q92785 391 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 KIAA1191Q96A73 305 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 C3orf49Q96BT1 292 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ARMC5Q96C12 935 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 DEFA5Q01523 94 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 EARS2Q5JPH6 523 aaKnown RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 PRPF38BQ5VTL8 546 aaKnown RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 LIPJQ5W064 366 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MON1BQ7L1V2 547 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SMIM15Q7Z3B0 74 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 FAM131BQ86XD5 332 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 RASGRP3Q8IV61 690 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF614Q8N883 585 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 TRIM43Q96BQ3 446 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 PYURFQ96I23 114 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 TCF25Q9BQ70 676 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 FEM1AQ9BSK4 669 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 AGO1Q9UL18 857 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms