RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SLC6A16Q9GZN6 736 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 LRRC72A6NJI9 287 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 DRD1P21728 446 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 RPS26P62854 115 aaKnown RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 TMEM259Q4ZIN3 620 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 FOXB2Q5VYV0 432 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 TMEM92Q6UXU6 159 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 ZZZ3Q8IYH5 903 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 METTL2AQ96IZ6 378 aaKnown RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 TIMM29Q9BSF4 260 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 MRPS26Q9BYN8 205 aaKnown RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 ABCG4Q9H172 646 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 NTN4Q9HB63 628 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 NDUFS4O43181 175 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 LCMT2O60294 686 aaKnown RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 FURINP09958 794 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 CYP4B1P13584 511 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 PTGER1P34995 402 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 TXNL4AP83876 142 aaKnown RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 CTBSQ01459 385 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 TP53BP2Q13625 1128 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 RGNQ15493 299 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 COX20Q5RI15 118 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 TNFAIP8L2Q6P589 184 aaPredicted RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 RBM44Q6ZP01 1051 aaKnown RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 SPRED1Q7Z699 444 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 SERPINA11Q86U17 422 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 CARM1Q86X55 608 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 CALHM3Q86XJ0 350 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 GABRG3Q99928 467 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 NLNQ9BYT8 704 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 ADPRHL2Q9NX46 363 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 SPATA7Q9P0W8 599 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 BTNL2Q9UIR0 455 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 HEATR5BQ9P2D3 2071 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 GPR89AB7ZAQ6 455 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 NPIPB8E9PQR5 432 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 ERI3O43414 337 aaKnown RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 SUV39H1O43463 412 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 NARSO43776 548 aaKnown RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 GPR89BP0CG08 455 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 PPIBP23284 216 aaKnown RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 PRKAG1P54619 331 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 RAB8AP61006 207 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 RPE65Q16518 533 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 NADK2Q4G0N4 442 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 C10orf62Q5T681 223 aaPredicted RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 IRAK1BP1Q5VVH5 260 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 VN1R5Q7Z5H4 357 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 KLHDC8AQ8IYD2 350 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 FCRL1Q96LA6 429 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 ANKRD60Q9BZ19 345 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 BHLHE41Q9C0J9 482 aaPredicted RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 TMEM168Q9H0V1 697 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 CLK4Q9HAZ1 481 aaKnown RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 SCHIP1Q9P0W5 487 aaPredicted RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 TBC1D29Q9UFV1 150 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 SAMHD1Q9Y3Z3 626 aaKnown RBP13.06□□□□□ -0.32
CLK3-203ENST00000454830 COLEC10Q9Y6Z7 277 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 NINQ8N4C6 2090 aa13.06□□□□□ -0.32
CLK3-203ENST00000454830 GSAPA4D1B5 854 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 C5orf58C9J3I9 102 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 TNFRSF1BP20333 461 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 TPMTP51580 245 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 ALDH3A2P51648 485 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 SFSWAPQ12872 951 aaKnown RBP13.05□□□□□ -0.32
CLK3-203ENST00000454830 NUDT13Q86X67 352 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 TBC1D19Q8N5T2 526 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 MFSD2AQ8NA29 543 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 NFKBIDQ8NI38 313 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 RGMAQ96B86 450 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 ABHD8Q96I13 439 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 WDR92Q96MX6 357 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 QRFPRQ96P65 431 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 FAM192AQ9GZU8 254 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 PREBQ9HCU5 417 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 SPHK1Q9NYA1 384 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 TAS2R9Q9NYW1 312 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 FBXW2Q9UKT8 454 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 CYP8B1Q9UNU6 501 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 CORO2BQ9UQ03 480 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 CAPN5O15484 640 aaPredicted RBP13.05□□□□□ -0.32
CLK3-203ENST00000454830 FABP3P05413 133 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 SMIM18P0DKX4 95 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 ALPPL2P10696 532 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 GPX2P18283 190 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 TPP2P29144 1249 aaPredicted RBP13.05□□□□□ -0.32
CLK3-203ENST00000454830 GSSP48637 474 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 PRDX1Q06830 199 aaKnown RBP13.05□□□□□ -0.32
CLK3-203ENST00000454830 HEPACAMQ14CZ8 416 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 EOGTQ5NDL2 527 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 GCNT6Q5T4J0 391 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 GALNT18Q6P9A2 607 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 ABRAXAS1Q6UWZ7 409 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 SLC44A3Q8N4M1 653 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 ATG16L2Q8NAA4 619 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 WDR34Q96EX3 536 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 TRAPPC9Q96Q05 1148 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 TOR3AQ9H497 397 aa13.05□□□□□ -0.32
CLK3-203ENST00000454830 RIBC2Q9H4K1 309 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms