RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 WDR83Q9BRX9 315 aaKnown RBP4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 RHNO1Q9BSD3 238 aa4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 TUBB6Q9BUF5 446 aa4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 ARL15Q9NXU5 204 aa4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 IL1RAPL1Q9NZN1 696 aa4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 HCN3Q9P1Z3 774 aa4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 UBA2Q9UBT2 640 aaPredicted RBP4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 SCOCQ9UIL1 159 aa4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 PCDHA7Q9UN72 937 aa4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 LAMP3Q9UQV4 416 aa4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 COQ4Q9Y3A0 265 aa4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 PCDHGB3Q9Y5G1 929 aa4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 PTGDR2Q9Y5Y4 395 aa4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 CFAP20Q9Y6A4 193 aaKnown RBP4.82□□□□□ -1.64
SBDSP1-204ENST00000453858 SNRNP200O75643 2136 aaKnown RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 A0A1W2PQ67 120 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 PINLYPA6NC86 204 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 KLRC4-KLRK1H3BQV0 150 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 EPHB6O15197 1021 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 KLRC4O43908 158 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 KIAA0513O60268 411 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 SOCS5O75159 536 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 DAB1O75553 588 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 PLAUP00749 431 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 SOD3P08294 240 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 GABRA1P14867 456 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 GYPEP15421 78 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 CTPS1P17812 591 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 HLA-DPA1P20036 260 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 CTSSP25774 331 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 EPHB2P29323 1055 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 CRHR1P34998 444 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 PRKCIP41743 596 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 HALP42357 657 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 PCYT1AP49585 367 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 ADARP55265 1226 aaKnown RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 MLF1P58340 268 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 YBEYP58557 167 aaPredicted RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 BPIFB4P59827 614 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 HILS1P60008 231 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 AP1S1P61966 158 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 RPS4XP62701 263 aaKnown RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 OC90Q02509 493 aaPredicted RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 LGALS3BPQ08380 585 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 TRAF2Q12933 501 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 PDCLQ13371 301 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 PIN1Q13526 163 aaPredicted RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 MEA1Q16626 185 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 RNF151Q2KHN1 245 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 BEAN1Q3B7T3 259 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 SLC25A52Q3SY17 297 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 RAB6CQ53S08 254 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 RRAGBQ5VZM2 374 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 METRNLQ641Q3 311 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 KRT39Q6A163 491 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 TTI2Q6NXR4 508 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 KIAA0408Q6ZU52 694 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 USP43Q70EL4 1123 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 SLC26A9Q7LBE3 791 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 UMODL1-AS1Q8N2C9 162 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 MIER2Q8N344 545 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 SYT8Q8NBV8 401 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 FBXL13Q8NEE6 735 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 ZNF397Q8NF99 534 aaPredicted RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 EID2BQ96D98 161 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 NEIL1Q96FI4 390 aaPredicted RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 TRMT61AQ96FX7 289 aaKnown RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 CAPZA3Q96KX2 299 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 TEKT5Q96M29 485 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 QRFPRQ96P65 431 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 TRIB1Q96RU8 372 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 CPXM1Q96SM3 734 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 TBCBQ99426 244 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 TMEM204Q9BSN7 226 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 RBM4Q9BWF3 364 aaKnown RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 NAA15Q9BXJ9 866 aaKnown RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 RAB6CQ9H0N0 254 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 SLITRK2Q9H156 845 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 LRRC19Q9H756 370 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 UPF2Q9HAU5 1272 aaKnown RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 DEPPQ9NTK1 212 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 EURLQ9NYK6 297 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 ZNF282Q9UDV7 671 aaPredicted RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 NDRG3Q9UGV2 375 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 ACAD8Q9UKU7 415 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 CNOT11Q9UKZ1 510 aaKnown RBP4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 PSMD13Q9UNM6 376 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 LIMCH1Q9UPQ0 1083 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 PLCL2Q9UPR0 1127 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 MAU2Q9Y6X3 613 aa4.81□□□□□ -1.64
SBDSP1-204ENST00000453858 GTPBP10A4D1E9 387 aaKnown RBP4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 NPEPPSL1A6NEC2 478 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 LRRC14BA6NHZ5 514 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 HS3ST1O14792 307 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 AKAP10O43572 662 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 KCNJ13O60928 360 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PALMO75781 387 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 TOX4O94842 621 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PGLSO95336 258 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PRB2P02812 416 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms