RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CALCOCO2Q13137 446 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ITGADQ13349 1161 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 PON2Q15165 354 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 HSPB2Q16082 182 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 BCL2A1Q16548 175 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 LACTB2Q53H82 288 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 PAGE2BQ5JRK9 111 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 PDZK1Q5T2W1 519 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 TMEM63BQ5T3F8 832 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 GRTP1Q5TC63 336 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 C20orf194Q5TEA3 1177 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 AGAP6Q5VW22 663 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 CLEC6AQ6EIG7 209 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 SNRNP48Q6IEG0 339 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 PRR27Q6MZM9 219 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 MFSD12Q6NUT3 480 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 NIPAL3Q6P499 406 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 CBLN3Q6UW01 205 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 BTNL8Q6UX41 500 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 COLCA1Q6ZS62 124 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 FRA10AC1Q70Z53 315 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 MEPCEQ7L2J0 689 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 RD3Q7Z3Z2 195 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 MDGA2Q7Z553 956 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 STX12Q86Y82 276 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 TMPRSS6Q8IU80 811 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 VSTM4Q8IW00 320 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 SLC35F3Q8IY50 421 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 LAS2Q8IYD9 372 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 GPR65Q8IYL9 337 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZNF683Q8IZ20 524 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 PNPLA1Q8N8W4 532 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 SIDT2Q8NBJ9 832 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ENGASEQ8NFI3 743 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 GJC3Q8NFK1 279 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 TBC1D16Q8TBP0 767 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 GLG1Q92896 1179 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 SLCO2A1Q92959 643 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 FAM136AQ96C01 138 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 FBXL8Q96CD0 374 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 RBM41Q96IZ5 413 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 C8orf49Q96NF6 230 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 SLITRK1Q96PX8 696 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ACOX2Q99424 681 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 RBM4BQ9BQ04 359 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 RTP3Q9BQQ7 232 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 EFHD1Q9BUP0 239 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 FNDC11Q9BVV2 318 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 RBM4Q9BWF3 364 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ANKRD60Q9BZ19 345 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 WWTR1Q9GZV5 400 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 IL22Q9GZX6 179 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ANKRA2Q9H9E1 313 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 CDH20Q9HBT6 801 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZNF275Q9NSD4 429 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 FKBP14Q9NWM8 211 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ANKRD10Q9NXR5 420 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 NKIRAS1Q9NYS0 192 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 GGA2Q9UJY4 613 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 FBXO4Q9UKT5 387 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 PIGLQ9Y2B2 252 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 CA5BQ9Y2D0 317 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 RHBDD3Q9Y3P4 386 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 SRPRBQ9Y5M8 271 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 MAD1L1Q9Y6D9 718 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ADCY9O60503 1353 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 GOLGA8QA0A0J9YX86 632 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 A1L4Q6 167 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 DRGXA6NNA5 263 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 PPIAL4DF5H284 164 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 AP4M1O00189 453 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 BCKDKO14874 412 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 MATN3O15232 486 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CYP27B1O15528 508 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 HOXA3O43365 443 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 XRCC3O43542 346 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 DUX1O43812 170 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 STX11O75558 287 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 STC2O76061 302 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 PDE5AO76074 875 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 SYNGR4O95473 234 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 NFATC1O95644 943 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 MOCS2O96007 188 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 FTH1P02794 183 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 SFTPBP07988 381 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 NUDT17P0C025 328 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 SAGP10523 405 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CAPN2P17655 700 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 AMD1P17707 334 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 TCN1P20061 433 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 TPSB2P20231 275 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CCNOP22674 350 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 MPZP25189 248 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 HIBADHP31937 336 aaKnown RBP4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 GKP32189 559 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 DCTDP32321 178 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CD80P33681 288 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 PPP1R2P41236 205 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CRATP43155 626 aa4.18□□□□□ -1.74
HMGB3P21-201ENST00000452483 CDX1P47902 265 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms