RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 PRR35P0CG20 571 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 AP1S2P56377 157 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 SKP1P63208 163 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 CSNK1G2P78368 415 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 Q0VFX4 171 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 CCDC153Q494R4 210 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 B3GNTL1Q67FW5 361 aaPredicted RBP20.48■□□□□ 0.87
C9orf3-208ENST00000451893 ZC3H7AQ8IWR0 971 aaKnown RBP20.48■□□□□ 0.87
C9orf3-208ENST00000451893 SUN3Q8TAQ9 357 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 SLC13A3Q8WWT9 602 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 MAGEB18Q96M61 343 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 PSMG3-AS1Q96PY0 264 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 TGIF2Q9GZN2 237 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 HCN3Q9P1Z3 774 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 ACOT9Q9Y305 439 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 CYSRT1A8MQ03 144 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 DDAH2O95865 285 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 SERPINA7P05543 415 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 DHRS4L1P0CG22 281 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 ETV4P43268 484 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 TSFMP43897 325 aaKnown RBP20.47■□□□□ 0.87
C9orf3-208ENST00000451893 CCR8P51685 355 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 WDR4P57081 412 aaKnown RBP20.47■□□□□ 0.87
C9orf3-208ENST00000451893 PHKG1Q16816 387 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 C4orf17Q53FE4 359 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 IGFL2Q6UWQ7 119 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 RIPOR1Q6ZS17 1223 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 RAPH1Q70E73 1250 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 TRIM42Q8IWZ5 723 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 OR1N1Q8NGS0 311 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 C5orf34Q96MH7 638 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 MACROD1Q9BQ69 325 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 MESP1Q9BRJ9 268 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 SYNPO2LQ9H987 977 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 PLEKHB1Q9UF11 243 aaPredicted RBP20.47■□□□□ 0.87
C9orf3-208ENST00000451893 TEKT2Q9UIF3 430 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 MID2Q9UJV3 735 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 MRPS2Q9Y399 296 aaKnown RBP20.47■□□□□ 0.87
C9orf3-208ENST00000451893 DYRK1BQ9Y463 629 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 RELNP78509 3460 aa20.47■□□□□ 0.87
C9orf3-208ENST00000451893 SPENQ96T58 3664 aaKnown RBP20.46■□□□□ 0.87
C9orf3-208ENST00000451893 KCNE1BA0A087WTH5 132 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 A1L4Q6 167 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 GMNCA6NCL1 334 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 SGK494L7N484 410 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 BIRC5O15392 142 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 KLHL18O94889 574 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 BMP10O95393 424 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 CBX6O95503 412 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 BCL6P41182 706 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 XCR1P46094 333 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 CSHL1Q14406 222 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 TSNAXIP1Q2TAA8 658 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 RGS9BPQ6ZS82 235 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 FRA10AC1Q70Z53 315 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 OR51Q1Q8NH59 317 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 MGARPQ8TDB4 240 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 PYCR2Q96C36 320 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 EGFL8Q99944 293 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 TUBB6Q9BUF5 446 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 SLC5A6Q9Y289 635 aa20.46■□□□□ 0.87
C9orf3-208ENST00000451893 COL12A1Q99715 3063 aa20.45■□□□□ 0.86
C9orf3-208ENST00000451893 NDUFS4O43181 175 aa20.45■□□□□ 0.86
C9orf3-208ENST00000451893 OR1F1O43749 312 aa20.45■□□□□ 0.86
C9orf3-208ENST00000451893 ENO2P09104 434 aaPredicted RBP20.45■□□□□ 0.86
C9orf3-208ENST00000451893 TAS2R39P59534 338 aa20.45■□□□□ 0.86
C9orf3-208ENST00000451893 ABHD17BQ5VST6 288 aa20.45■□□□□ 0.86
C9orf3-208ENST00000451893 VN1R4Q7Z5H5 301 aa20.45■□□□□ 0.86
C9orf3-208ENST00000451893 GRHL3Q8TE85 626 aa20.45■□□□□ 0.86
C9orf3-208ENST00000451893 SGPP1Q9BX95 441 aa20.45■□□□□ 0.86
C9orf3-208ENST00000451893 ZNF700Q9H0M5 742 aa20.45■□□□□ 0.86
C9orf3-208ENST00000451893 PRM3Q9NNZ6 103 aa20.45■□□□□ 0.86
C9orf3-208ENST00000451893 SH2B3Q9UQQ2 575 aa20.45■□□□□ 0.86
C9orf3-208ENST00000451893 RDH16O75452 317 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 TIAL1Q01085 375 aaKnown RBP eCLIP20.44■□□□□ 0.86
C9orf3-208ENST00000451893 MEF2AQ02078 507 aaPredicted RBP20.44■□□□□ 0.86
C9orf3-208ENST00000451893 RGS1Q08116 209 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 HERC3Q15034 1050 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 PDK4Q16654 411 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 BTBD16Q32M84 506 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 TMEM214Q6NUQ4 689 aaKnown RBP20.44■□□□□ 0.86
C9orf3-208ENST00000451893 CMC1Q7Z7K0 106 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 TBC1D1Q86TI0 1168 aaPredicted RBP20.44■□□□□ 0.86
C9orf3-208ENST00000451893 NKAPQ8N5F7 415 aaKnown RBP20.44■□□□□ 0.86
C9orf3-208ENST00000451893 BCORP1Q8N888 145 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 MFSD9Q8NBP5 474 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 KCT2Q8NC54 265 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 ST6GALNAC3Q8NDV1 305 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 CATSPER1Q8NEC5 780 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 RAB3IL1Q8TBN0 382 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 CHMP6Q96FZ7 201 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 FAM111AQ96PZ2 611 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 PAIP2Q9BPZ3 127 aaKnown RBP20.44■□□□□ 0.86
C9orf3-208ENST00000451893 VN1R1Q9GZP7 353 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 CAB39LQ9H9S4 337 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 PLA2G3Q9NZ20 509 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 ICE1Q9Y2F5 2266 aa20.44■□□□□ 0.86
C9orf3-208ENST00000451893 SPTBN1Q01082 2364 aaKnown RBP20.44■□□□□ 0.86
C9orf3-208ENST00000451893 TRAV17A0A0B4J275 112 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 CCDC189A1A4V9 331 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms