RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 VN1R5Q7Z5H4 357 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 CRLF3Q8IUI8 442 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 BEST3Q8N1M1 668 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 CA13Q8N1Q1 262 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 BCORP1Q8N888 145 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 ELP5Q8TE02 316 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 NR4A3Q92570 626 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 CDKL2Q92772 493 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 ESAMQ96AP7 390 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 NT5DC2Q9H857 520 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 CLK4Q9HAZ1 481 aaKnown RBP11.61□□□□□ -0.55
MSH5-209ENST00000450148 OLAHQ9NV23 265 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 ASB1Q9Y576 335 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 CLDN16Q9Y5I7 305 aa11.61□□□□□ -0.55
MSH5-209ENST00000450148 TCRBV16S1A1N1A0A5B0 115 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 A1L4Q6 167 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 A8MUI8 341 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 FAM227AF5H4B4 570 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 B4GALT2O60909 372 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 WISP2O76076 250 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 STMN1P16949 149 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 CD22P20273 847 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 MST1P26927 711 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 HNRNPH1P31943 449 aaKnown RBP11.6□□□□□ -0.55
MSH5-209ENST00000450148 MAGEA4P43358 317 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 ST13P50502 369 aaKnown RBP11.6□□□□□ -0.55
MSH5-209ENST00000450148 SLC12A2P55011 1212 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 OR4D2P58180 307 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 SKP1P63208 163 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 SRSF11Q05519 484 aaKnown RBP11.6□□□□□ -0.55
MSH5-209ENST00000450148 RUNX2Q13950 521 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 E2F2Q14209 437 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 ELOAQ14241 798 aaKnown RBP11.6□□□□□ -0.55
MSH5-209ENST00000450148 SLBPQ14493 270 aaKnown RBP eCLIP11.6□□□□□ -0.55
MSH5-209ENST00000450148 EXT1Q16394 746 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 ADPRMQ3LIE5 342 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 C4orf17Q53FE4 359 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 TOR1AIP1Q5JTV8 583 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 ACER2Q5QJU3 275 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 ADNP2Q6IQ32 1131 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 TMIGD1Q6UXZ0 262 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 FRA10AC1Q70Z53 315 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 PDPRQ8NCN5 879 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 MDS2Q8NDY4 140 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 NFAM1Q8NET5 270 aaPredicted RBP11.6□□□□□ -0.55
MSH5-209ENST00000450148 KIAA1191Q96A73 305 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 MS4A6EQ96DS6 147 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 WDR34Q96EX3 536 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 TSPAN17Q96FV3 270 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 ZNF354BQ96LW1 612 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 C5orf34Q96MH7 638 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 QRFPRQ96P65 431 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 LPAR4Q99677 370 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.6□□□□□ -0.55
MSH5-209ENST00000450148 KCNK13Q9HB14 408 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 NECTIN3Q9NQS3 549 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 GPRC5BQ9NZH0 403 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 PTBP2Q9UKA9 531 aaKnown RBP11.6□□□□□ -0.55
MSH5-209ENST00000450148 ZNF490Q9ULM2 529 aaPredicted RBP11.6□□□□□ -0.55
MSH5-209ENST00000450148 UTP11Q9Y3A2 253 aaKnown RBP11.6□□□□□ -0.55
MSH5-209ENST00000450148 GTF3C1Q12789 2109 aa11.6□□□□□ -0.55
MSH5-209ENST00000450148 LRIT2A6NDA9 550 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 URADA6NGE7 173 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 PRAMEF2O60811 474 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 CLEC3AO75596 197 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 STSP08842 583 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 SLC35E2BP0CK96 405 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 RNH1P13489 461 aaKnown RBP11.59□□□□□ -0.55
MSH5-209ENST00000450148 MAOAP21397 527 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 JAK1P23458 1154 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 SPRP35270 261 aaPredicted RBP11.59□□□□□ -0.55
MSH5-209ENST00000450148 HSPA7P48741 367 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 RAB10P61026 200 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 ATP6V0D1P61421 351 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 CAV1Q03135 178 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 TUBA3CQ13748 450 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 EFTUD2Q15029 972 aaKnown RBP eCLIP11.59□□□□□ -0.552e-16■■■■■ 41.1
MSH5-209ENST00000450148 GRTP1Q5TC63 336 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 SULT1C3Q6IMI6 304 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 TUBA3EQ6PEY2 450 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 CMC1Q7Z7K0 106 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 ISCA2Q86U28 154 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 GPSM1Q86YR5 675 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 CTAGE3PQ8IX95 158 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 TCAIMQ8N3R3 496 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 KIF2BQ8N4N8 673 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 PPM1NQ8N819 430 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 FBF1Q8TES7 1133 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 GAL3ST3Q96A11 431 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 MAGEB10Q96LZ2 347 aaPredicted RBP11.59□□□□□ -0.55
MSH5-209ENST00000450148 PTCHD1Q96NR3 888 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 SIGLEC12Q96PQ1 595 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 ATOH8Q96SQ7 321 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 PITHD1Q9GZP4 211 aaPredicted RBP11.59□□□□□ -0.55
MSH5-209ENST00000450148 RAB17Q9H0T7 212 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 EHD1Q9H4M9 534 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 DNAJC11Q9NVH1 559 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 WWOXQ9NZC7 414 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 ABI3Q9P2A4 366 aa11.59□□□□□ -0.55
MSH5-209ENST00000450148 TEKT2Q9UIF3 430 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms