RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 MCFD2Q8NI22 146 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 CPT1CQ8TCG5 803 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 ST6GALNAC4Q9H4F1 302 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 WDR6Q9NNW5 1121 aaKnown RBP12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 PNPLA3Q9NST1 481 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 RDH8Q9NYR8 311 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 RNF11Q9Y3C5 154 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 WDR45Q9Y484 360 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 CSTAP01040 98 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 CD79AP11912 226 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 GADD45AP24522 165 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 GLB1L3Q8NCI6 653 aaPredicted RBP12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 GLYATL1Q969I3 302 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 CHIAQ9BZP6 476 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 CYTH4Q9UIA0 394 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 TELO2Q9Y4R8 837 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 PCDHGB2Q9Y5G2 931 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 MICAL3Q7RTP6 2002 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 FTCDNL1E5RQL4 147 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 CLIC1O00299 241 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 BRINP1O60477 761 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 CTSAP10619 480 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 DEFB103AP81534 67 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 C14orf80Q86SX3 495 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 SLCO6A1Q86UG4 719 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 NATD1Q8N6N6 113 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 NSMAFQ92636 917 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 ZNF285Q96NJ3 590 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 CD180Q99467 661 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 CLK4Q9HAZ1 481 aaKnown RBP12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 TIMM8BQ9Y5J9 83 aaPredicted RBP12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 LTN1O94822 1766 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 FAM240BA0A1B0GVZ2 78 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 PROS1P07225 676 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 GSTT2BP0CG30 244 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 HNRNPA2B1P22626 353 aaKnown RBP12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 RALGPS1Q5JS13 557 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 ZNF782Q6ZMW2 699 aaPredicted RBP12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 TRABD2AQ86V40 505 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 SERINC5Q86VE9 423 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 C7orf57Q8NEG2 295 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 LRRC58Q96CX6 371 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 IFT172Q9UG01 1749 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 EFCAB7A8K855 629 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 RFXAPO00287 272 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 CHRNB2P17787 502 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 GTF2IRD2BQ6EKJ0 949 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 GTF2IRD2Q86UP8 949 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 TMEM25Q86YD3 366 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 TICAM1Q8IUC6 712 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 HERPUD2Q9BSE4 406 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 MVB12BQ9H7P6 319 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 L2HGDHQ9H9P8 463 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 FADS3Q9Y5Q0 445 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 SALL3Q9BXA9 1300 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 DPPA5A6NC42 116 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 FOXO6A8MYZ6 492 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 NADKO95544 446 aaPredicted RBP12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 PRAMEF17Q5VTA0 474 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 IL17RCQ8NAC3 791 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 EIF2B3Q9NR50 452 aaKnown RBP12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 MS4A12Q9NXJ0 267 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 CAPN5O15484 640 aaPredicted RBP12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 PRAMEF11O60813 436 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 GSRP00390 522 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 SRCP12931 536 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 RORAP35398 523 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 ACY1Q03154 408 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 NCEH1Q6PIU2 408 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 GALNT10Q86SR1 603 aa12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 NANOS1Q8WY41 292 aaKnown RBP12.3□□□□□ -0.44
AC006001.3-201ENST00000449307 CDC14CA4D256 554 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 NPHS1O60500 1241 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 LCA5LO95447 670 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 RNH1P13489 461 aaKnown RBP12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 OLIG2Q13516 323 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 APLFQ8IW19 511 aaPredicted RBP12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 TRAM1L1Q8N609 369 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 OR6N2Q8NGY6 317 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 TMEM41AQ96HV5 264 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 C14orf166Q9Y224 244 aaKnown RBP12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 FARSAQ9Y285 508 aaKnown RBP12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 SLIT2O94813 1529 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 PEAK1Q9H792 1746 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 IGKV6D-41A0A0C4DH26 115 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 SMCO3A2RU48 225 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 ITGB1P05556 798 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 H2BFMP0C1H6 154 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 MLLT10P55197 1068 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 RPS15AP62244 130 aaKnown RBP12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 MERTKQ12866 999 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 SNIP1Q8TAD8 396 aaKnown RBP12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 ALPK1Q96QP1 1244 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 DUSP23Q9BVJ7 150 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 TMED9Q9BVK6 235 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 PCDHB16Q9NRJ7 776 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 ZNF226Q9NYT6 803 aa12.29□□□□□ -0.44
AC006001.3-201ENST00000449307 ADGRB1O14514 1584 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms