RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 LIPJQ5W064 366 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 PGM2L1Q6PCE3 622 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 RANBP3LQ86VV4 465 aaPredicted RBP6.9□□□□□ -1.3
BEST1-202ENST00000449131 SLC30A8Q8IWU4 369 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 CELF5Q8N6W0 485 aaKnown RBP6.9□□□□□ -1.3
BEST1-202ENST00000449131 GPR150Q8NGU9 434 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 BPIFB1Q8TDL5 484 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 FRS2Q8WU20 508 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 PRAP1Q96NZ9 151 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 GFM1Q96RP9 751 aaKnown RBP6.9□□□□□ -1.3
BEST1-202ENST00000449131 TBX5Q99593 518 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 UCK2Q9BZX2 261 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 SPHK2Q9NRA0 654 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 TMEM181Q9P2C4 612 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 ERVK-18Q9QC07 812 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 UTS2RQ9UKP6 389 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 CFL2Q9Y281 166 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 HCN4Q9Y3Q4 1203 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 ECM29Q5VYK3 1845 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 LAMB1P07942 1786 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 LOC285095A0A1B0GVY8 99 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 TMX2-CTNND1H3BSU7 103 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 GNB5O14775 395 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 ATE1O95260 518 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 CH25HO95992 272 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 DHFRP00374 187 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 POLR2IP36954 125 aaKnown RBP6.9□□□□□ -1.3
BEST1-202ENST00000449131 LASP1Q14847 261 aaKnown RBP6.9□□□□□ -1.3
BEST1-202ENST00000449131 GPR68Q15743 365 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 TPRG1LQ5T0D9 272 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 FAM180BQ6P0A1 224 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 ENPP7Q6UWV6 458 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 C7orf61Q8IZ16 206 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 LSMEM2Q8N112 164 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 DTWD1Q8N5C7 304 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 GOLM1Q8NBJ4 401 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 FNDC8Q8TC99 324 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 SNX33Q8WV41 574 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 KLHL6Q8WZ60 621 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 PIK3R3Q92569 461 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 TMEM125Q96AQ2 219 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 IL17FQ96PD4 163 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 BEX2Q9BXY8 128 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 TMEM138Q9NPI0 162 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 FAM118AQ9NWS6 357 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 ING3Q9NXR8 418 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 HCSTQ9UBK5 93 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 RIMS3Q9UJD0 308 aa6.9□□□□□ -1.3
BEST1-202ENST00000449131 EDDM13A0A1B0GTR0 161 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 DRGXA6NNA5 263 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 NDUFS4O43181 175 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 ALPPL2P10696 532 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 JUPP14923 745 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 CSF2RAP15509 400 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 AGXTP21549 392 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 RAB15P59190 212 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 RPP38P78345 283 aaKnown RBP6.9□□□□□ -1.31
BEST1-202ENST00000449131 MINDY4Q4G0A6 757 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 ZNF805Q5CZA5 627 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 CRTC1Q6UUV9 634 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.9□□□□□ -1.31
BEST1-202ENST00000449131 VTCN1Q7Z7D3 282 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 HMGN2P46Q86SG4 172 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 CLEC14AQ86T13 490 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 CLECL1Q8IZS7 167 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 POF1BQ8WVV4 589 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 UFD1Q92890 307 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 NT5C3BQ969T7 300 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 ATOH8Q96SQ7 321 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 IER2Q9BTL4 223 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 IFT27Q9BW83 186 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 IL1RAPQ9NPH3 570 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 ARMC1Q9NVT9 282 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 DNAJC27Q9NZQ0 273 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 ING4Q9UNL4 249 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 RNF6Q9Y252 685 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 WDR37Q9Y2I8 494 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 RWDD3Q9Y3V2 267 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 SESN1Q9Y6P5 492 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 KIAA0100Q14667 2235 aaKnown RBP6.9□□□□□ -1.31
BEST1-202ENST00000449131 CEP350Q5VT06 3117 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 TTC34A8MYJ7 566 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 KHDRBS3O75525 346 aaKnown RBP6.9□□□□□ -1.31
BEST1-202ENST00000449131 MT-ND2P03891 347 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 RPS17P08708 135 aaKnown RBP6.9□□□□□ -1.31
BEST1-202ENST00000449131 MPC1LP0DKB6 136 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 C1GALT1C1LP0DN25 315 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 C7P10643 843 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 GGT1P19440 569 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 ALAS2P22557 587 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 DDX6P26196 483 aaKnown RBP eCLIP6.9□□□□□ -1.31
BEST1-202ENST00000449131 TIA1P31483 386 aaKnown RBP eCLIP6.9□□□□□ -1.31
BEST1-202ENST00000449131 SPINT3P49223 89 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 GPM6BQ13491 265 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 KCNC3Q14003 757 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 TAF13Q15543 124 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 ZNF404Q494X3 552 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 REEP3Q6NUK4 255 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 RETREG3Q86VR2 466 aa6.9□□□□□ -1.31
BEST1-202ENST00000449131 TMEM25Q86YD3 366 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms