RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 EIF3FO00303 357 aaPredicted RBP13.11□□□□□ -0.31
POLR1B-209ENST00000448770 SAP18O00422 153 aaKnown RBP13.11□□□□□ -0.31
POLR1B-209ENST00000448770 GPX5O75715 221 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 C6orf47O95873 294 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 IGFBP1P08833 259 aaPredicted RBP13.11□□□□□ -0.31
POLR1B-209ENST00000448770 SELPP16109 830 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 LIMS1P48059 325 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 TGM4P49221 684 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 RPS13P62277 151 aaKnown RBP13.11□□□□□ -0.31
POLR1B-209ENST00000448770 EEF1A2Q05639 463 aaKnown RBP13.11□□□□□ -0.31
POLR1B-209ENST00000448770 SP140Q13342 867 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 CCDC92Q53HC0 331 aaPredicted RBP13.11□□□□□ -0.31
POLR1B-209ENST00000448770 C19orf48Q6RUI8 117 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 CCDC190Q86UF4 302 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 AMER2Q8N7J2 671 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 OR7G3Q8NG95 312 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 CHTF18Q8WVB6 975 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 LMLNQ96KR4 655 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 TCF25Q9BQ70 676 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 TMEM175Q9BSA9 504 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
POLR1B-209ENST00000448770 TP63Q9H3D4 680 aaPredicted RBP13.11□□□□□ -0.31
POLR1B-209ENST00000448770 ACER3Q9NUN7 267 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 PPIL1Q9Y3C6 166 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 SNX8Q9Y5X2 465 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 A3GALT2U3KPV4 340 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 TTC36A6NLP5 189 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 ARHGAP33O14559 1287 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 NPC1O15118 1278 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 OLFM2O95897 454 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 SLC16A8O95907 504 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 CTSAP10619 480 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 HLA-FP30511 346 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 CTSCP53634 463 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 CSNK2BP67870 215 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 PTGES3Q15185 160 aaKnown RBP13.11□□□□□ -0.31
POLR1B-209ENST00000448770 ZMAT1Q5H9K5 638 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 PLEKHS1Q5SXH7 462 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 GRHL2Q6ISB3 625 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 C22orf39Q6P5X5 142 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 AGTRAPQ6RW13 159 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 HSD11B1LQ7Z5J1 315 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 CAMKMTQ7Z624 323 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 ZNF605Q86T29 641 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 CMTM8Q8IZV2 173 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 SLC43A3Q8NBI5 491 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 CAPSLQ8WWF8 208 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 NEDD4LQ96PU5 975 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 FAM129BQ96TA1 746 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 EMILIN2Q9BXX0 1053 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 BARHL1Q9BZE3 327 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 FTSJ1Q9UET6 329 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 POFUT2Q9Y2G5 429 aa13.11□□□□□ -0.31
POLR1B-209ENST00000448770 KIAA1671Q9BY89 1806 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 FADS2P1A8MWK0 482 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 H0YIV9 168 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 H3BM21 787 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 ADAMDEC1O15204 470 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 DYRK3O43781 588 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 GJA1P17302 382 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 IMPA1P29218 277 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 CCL23P55773 120 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 AP1S2P56377 157 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 ZNF45Q02386 682 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 LEXMQ3ZCV2 418 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 IFI44LQ53G44 452 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 USP45Q70EL2 814 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 ARMCX6Q7L4S7 300 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 KBTBD8Q8NFY9 601 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 ZNF486Q96H40 463 aaPredicted RBP13.1□□□□□ -0.31
POLR1B-209ENST00000448770 DUSP12Q9UNI6 340 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 SLC16A5O15375 505 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 SEMA7AO75326 666 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 LATS1O95835 1130 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 GSTM1P09488 218 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 CBLP22681 906 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 MAPK8P45983 427 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 SCARB2Q14108 478 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 MED22Q15528 200 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 KLHL17Q6TDP4 642 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 HS6ST3Q8IZP7 471 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 VANGL1Q8TAA9 524 aaPredicted RBP13.1□□□□□ -0.31
POLR1B-209ENST00000448770 WDR48Q8TAF3 677 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.1□□□□□ -0.31
POLR1B-209ENST00000448770 NEIL2Q969S2 332 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 SCLYQ96I15 445 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 OPALINQ96PE5 141 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 SLC35A5Q9BS91 424 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 SPNS1Q9H2V7 528 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 C1GALT1Q9NS00 363 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 EHD3Q9NZN3 535 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 CFAP97Q9P2B7 532 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 ITGB1BP2Q9UKP3 347 aa13.1□□□□□ -0.31
POLR1B-209ENST00000448770 PCM1Q15154 2024 aa13.09□□□□□ -0.31
POLR1B-209ENST00000448770 PRRC2BQ5JSZ5 2229 aaKnown RBP13.09□□□□□ -0.31
POLR1B-209ENST00000448770 CCDC88CQ9P219 2028 aa13.09□□□□□ -0.31
POLR1B-209ENST00000448770 GNG14A0A1W2PPG7 69 aa13.09□□□□□ -0.31
POLR1B-209ENST00000448770 ZW10O43264 779 aa13.09□□□□□ -0.31
POLR1B-209ENST00000448770 TSPAN6O43657 245 aa13.09□□□□□ -0.31
POLR1B-209ENST00000448770 ASNA1O43681 348 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms