RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 DNAJC11Q9NVH1 559 aa16.65■□□□□ 0.26
DDX56-207ENST00000448192 CD274Q9NZQ7 290 aa16.65■□□□□ 0.26
DDX56-207ENST00000448192 PLEKHB1Q9UF11 243 aaPredicted RBP16.65■□□□□ 0.26
DDX56-207ENST00000448192 SLC5A6Q9Y289 635 aa16.65■□□□□ 0.26
DDX56-207ENST00000448192 MAST4O15021 2626 aa16.65■□□□□ 0.26
DDX56-207ENST00000448192 SPTBN1Q01082 2364 aaKnown RBP16.64■□□□□ 0.25
DDX56-207ENST00000448192 SVILO95425 2214 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 ESYT3A0FGR9 886 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 A1L4Q6 167 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 OR5H15A6NDH6 313 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 C4orf51C9J302 202 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 PSMD12O00232 456 aaPredicted RBP16.64■□□□□ 0.25
DDX56-207ENST00000448192 E2F3O00716 465 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 CLGNO14967 610 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 PRMT3O60678 531 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 DDAH2O95865 285 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 S100BP04271 92 aaPredicted RBP16.64■□□□□ 0.25
DDX56-207ENST00000448192 RNH1P13489 461 aaKnown RBP16.64■□□□□ 0.25
DDX56-207ENST00000448192 EDN3P14138 238 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 STX2P32856 288 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 GMPRP36959 345 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 HSPA7P48741 367 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 STXBP1P61764 594 aaKnown RBP16.64■□□□□ 0.25
DDX56-207ENST00000448192 CKAP4Q07065 602 aaKnown RBP16.64■□□□□ 0.25
DDX56-207ENST00000448192 SLMAPQ14BN4 828 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 ZKSCAN8Q15776 578 aaPredicted RBP16.64■□□□□ 0.25
DDX56-207ENST00000448192 SULT1C3Q6IMI6 304 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 ZNF572Q7Z3I7 529 aaPredicted RBP16.64■□□□□ 0.25
DDX56-207ENST00000448192 CYP4X1Q8N118 509 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 KRT78Q8N1N4 520 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 SNX31Q8N9S9 440 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 M1APQ8TC57 530 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 FAR2Q96K12 515 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 C5orf34Q96MH7 638 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 AICDAQ9GZX7 198 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 RNF32Q9H0A6 362 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 RNF112Q9ULX5 631 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 ZGRF1Q86YA3 2104 aa16.64■□□□□ 0.25
DDX56-207ENST00000448192 NBPF19A0A087WUL8 3843 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 A0A0G2JN53 185 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 FAM227AF5H4B4 570 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 SMIM10L1P0DMW3 83 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 MYBL2P10244 700 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 GGT5P36269 586 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 ST13P50502 369 aaKnown RBP16.63■□□□□ 0.25
DDX56-207ENST00000448192 BTN3A2P78410 334 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 BTG2P78543 158 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 EFTUD2Q15029 972 aaKnown RBP eCLIP16.63■□□□□ 0.259e-7■■■■■ 33.5
DDX56-207ENST00000448192 CDKL4Q5MAI5 379 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 ACER2Q5QJU3 275 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 HIST2H2BCQ6DN03 193 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 H3F3CQ6NXT2 135 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 C8orf74Q6P047 294 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 CMC1Q7Z7K0 106 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 CRLF3Q8IUI8 442 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 BEST3Q8N1M1 668 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 TTLQ8NG68 377 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 SMIM10Q96HG1 83 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 UBXN10Q96LJ8 280 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 TAAR6Q96RI8 345 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 CLK4Q9HAZ1 481 aaKnown RBP16.63■□□□□ 0.25
DDX56-207ENST00000448192 MMP25Q9NPA2 562 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 GPRC5BQ9NZH0 403 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 OSGIN2Q9Y236 505 aa16.63■□□□□ 0.25
DDX56-207ENST00000448192 ANKDD1BA6NHY2 528 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 ERI3O43414 337 aaKnown RBP16.62■□□□□ 0.25
DDX56-207ENST00000448192 PRAMEF2O60811 474 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 STK16O75716 305 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 URI1O94763 535 aaPredicted RBP16.62■□□□□ 0.25
DDX56-207ENST00000448192 MAOAP21397 527 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 HNRNPH1P31943 449 aaKnown RBP16.62■□□□□ 0.25
DDX56-207ENST00000448192 SLC26A5P58743 744 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 INAQ16352 499 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 PDK4Q16654 411 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 MEP1AQ16819 746 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 XKR6Q5GH73 641 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 QSOX2Q6ZRP7 698 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 CA13Q8N1Q1 262 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 GAL3ST3Q96A11 431 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 KIAA1191Q96A73 305 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 MRRFQ96E11 262 aaKnown RBP16.62■□□□□ 0.25
DDX56-207ENST00000448192 C16orf45Q96MC5 204 aaPredicted RBP16.62■□□□□ 0.25
DDX56-207ENST00000448192 SLX1AQ9BQ83 275 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 LRRC1Q9BTT6 524 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 ALG9Q9H6U8 611 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 PRDM9Q9NQV7 894 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 ABI3Q9P2A4 366 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 NAV2Q8IVL1 2488 aa16.62■□□□□ 0.25
DDX56-207ENST00000448192 LRIT2A6NDA9 550 aa16.61■□□□□ 0.25
DDX56-207ENST00000448192 CCNT2O60583 730 aaKnown RBP16.61■□□□□ 0.25
DDX56-207ENST00000448192 RASAL1O95294 804 aa16.61■□□□□ 0.25
DDX56-207ENST00000448192 LDLRP01130 860 aa16.61■□□□□ 0.25
DDX56-207ENST00000448192 SLC35E2BP0CK96 405 aa16.61■□□□□ 0.25
DDX56-207ENST00000448192 TFEBP19484 476 aa16.61■□□□□ 0.25
DDX56-207ENST00000448192 GSTM2P28161 218 aa16.61■□□□□ 0.25
DDX56-207ENST00000448192 KCNC1P48547 511 aa16.61■□□□□ 0.25
DDX56-207ENST00000448192 TAS2R50P59544 299 aa16.61■□□□□ 0.25
DDX56-207ENST00000448192 SRSF11Q05519 484 aaKnown RBP16.61■□□□□ 0.25
DDX56-207ENST00000448192 NAB1Q13506 487 aa16.61■□□□□ 0.25
DDX56-207ENST00000448192 DOC2AQ14183 400 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms