RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SH3BP4Q9P0V3 963 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 STOX2Q9P2F5 926 aaPredicted RBP18.32■□□□□ 0.52
SDCBP-204ENST00000447182 B4GALT6Q9UBX8 382 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 HS3ST2Q9Y278 367 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 RBMX2Q9Y388 322 aaKnown RBP18.32■□□□□ 0.52
SDCBP-204ENST00000447182 OBSL1O75147 1896 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 A0A1W2PQ45 241 aaPredicted RBP18.32■□□□□ 0.52
SDCBP-204ENST00000447182 A0A1W2PQY0 241 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 MPZL2O60487 215 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 OR1E2P47887 323 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 STK19P49842 368 aaPredicted RBP18.32■□□□□ 0.52
SDCBP-204ENST00000447182 NAE1Q13564 534 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 SCARB2Q14108 478 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 TCTN1Q2MV58 587 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 CRB2Q5IJ48 1285 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 C22orf39Q6P5X5 142 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 HTR3DQ70Z44 454 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 HUS1BQ8NHY5 278 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 IGSF21Q96ID5 467 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 MAPKAP1Q9BPZ7 522 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 FAM83CQ9BQN1 747 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 ZNF334Q9HCZ1 680 aaPredicted RBP18.32■□□□□ 0.52
SDCBP-204ENST00000447182 NPAP1Q9NZP6 1156 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 HCN4Q9Y3Q4 1203 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 A0A075B6Q4 140 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.31■□□□□ 0.52
SDCBP-204ENST00000447182 ARRDC5A6NEK1 342 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 SRPRAP08240 638 aaKnown RBP18.31■□□□□ 0.52
SDCBP-204ENST00000447182 CTSOP43234 321 aaPredicted RBP18.31■□□□□ 0.52
SDCBP-204ENST00000447182 XCR1P46094 333 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 CDC42P60953 191 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 HBA1P69905 142 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 EEF1A2Q05639 463 aaKnown RBP18.31■□□□□ 0.52
SDCBP-204ENST00000447182 CARTPTQ16568 116 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 ZNF385BQ569K4 471 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 SLX4IPQ5VYV7 408 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 ADNP2Q6IQ32 1131 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 ZNF852Q6ZMS4 543 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 ATCAYQ86WG3 371 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 IL17RDQ8NFM7 739 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 OR9Q2Q8NGE9 314 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.31■□□□□ 0.52
SDCBP-204ENST00000447182 GEMIN6Q8WXD5 167 aaKnown RBP18.31■□□□□ 0.52
SDCBP-204ENST00000447182 LMLNQ96KR4 655 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 PIP5K1AQ99755 562 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 EMILIN2Q9BXX0 1053 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 NUAK2Q9H093 628 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 REEP4Q9H6H4 257 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 SIAEQ9HAT2 523 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 STARD7Q9NQZ5 370 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 C1GALT1Q9NS00 363 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 ACER3Q9NUN7 267 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 EHD3Q9NZN3 535 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 CD84Q9UIB8 345 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 GNG14A0A1W2PPG7 69 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 KIAA0513O60268 411 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 MTX2O75431 263 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 APOA1P02647 267 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 CBLP22681 906 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 PTGES3Q15185 160 aaKnown RBP18.31■□□□□ 0.52
SDCBP-204ENST00000447182 SF3B4Q15427 424 aaKnown RBP eCLIP18.31■□□□□ 0.526e-7■■■■■ 30.8
SDCBP-204ENST00000447182 BBS7Q8IWZ6 715 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 OR56A3Q8NH54 315 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 SDHCQ99643 169 aaPredicted RBP18.31■□□□□ 0.52
SDCBP-204ENST00000447182 MGLLQ99685 303 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 TCF25Q9BQ70 676 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 SLC35A5Q9BS91 424 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 RRAGCQ9HB90 399 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 IL21Q9HBE4 155 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 TRAPPC4Q9Y296 219 aa18.31■□□□□ 0.52
SDCBP-204ENST00000447182 CAB39Q9Y376 341 aaPredicted RBP18.31■□□□□ 0.52
SDCBP-204ENST00000447182 A0A1W2PQ67 120 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 CCRL2O00421 344 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 ZW10O43264 779 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 POP4O95707 220 aaKnown RBP18.3■□□□□ 0.52
SDCBP-204ENST00000447182 HSMCR30P0CW71 290 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 ZNF8P17098 575 aaPredicted RBP18.3■□□□□ 0.52
SDCBP-204ENST00000447182 ALDH9A1P49189 494 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 CYP4F2P78329 520 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.3■□□□□ 0.52
SDCBP-204ENST00000447182 ANGPTL8Q6UXH0 198 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.3■□□□□ 0.52
SDCBP-204ENST00000447182 OXR1Q8N573 874 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 NFKBIDQ8NI38 313 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 MED8Q96G25 268 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 ZNF486Q96H40 463 aaPredicted RBP18.3■□□□□ 0.52
SDCBP-204ENST00000447182 OR5M11Q96RB7 305 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 TAPBPLQ9BX59 468 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 ZDHHC6Q9H6R6 413 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 FBXL12Q9NXK8 326 aa18.3■□□□□ 0.52
SDCBP-204ENST00000447182 ZAR1LA6NP61 321 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 A8MU76 341 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 PRRG1O14668 218 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 RGS13O14921 159 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 IFNA14P01570 189 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 DNTTP04053 509 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 PIPP12273 146 aaPredicted RBP18.29■□□□□ 0.52
SDCBP-204ENST00000447182 CHMP24386 653 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 SLC15A1P46059 708 aa18.29■□□□□ 0.52
SDCBP-204ENST00000447182 PNLIPRP1P54315 467 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms