RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 TBX6O95947 436 aaPredicted RBP19.49■□□□□ 0.71
SDC1-205ENST00000447124 MST1P26927 711 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 GGT5P36269 586 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 PLTPP55058 493 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 ETF1P62495 437 aaKnown RBP19.49■□□□□ 0.71
SDC1-205ENST00000447124 OR4D1Q15615 310 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 EXT1Q16394 746 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 TOR1AIP1Q5JTV8 583 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 SYT10Q6XYQ8 523 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 FRA10AC1Q70Z53 315 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 NR4A3Q92570 626 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 ZNF354BQ96LW1 612 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 PTCHD1Q96NR3 888 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 LPAR4Q99677 370 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 CLK4Q9HAZ1 481 aaKnown RBP19.49■□□□□ 0.71
SDC1-205ENST00000447124 TEKT2Q9UIF3 430 aa19.49■□□□□ 0.71
SDC1-205ENST00000447124 MYO7BQ6PIF6 2116 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 LRRTM2O43300 516 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 H2AFYO75367 372 aaKnown RBP19.48■□□□□ 0.71
SDC1-205ENST00000447124 GNAZP19086 355 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 GP5P40197 560 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 CD96P40200 585 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 SLC26A5P58743 744 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 RUNX2Q13950 521 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 NIPAL1Q6NVV3 410 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 GPSM1Q86YR5 675 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.48■□□□□ 0.71
SDC1-205ENST00000447124 CA13Q8N1Q1 262 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 FBXO25Q8TCJ0 367 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 CDKL2Q92772 493 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 UBXN10Q96LJ8 280 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 RHBGQ9H310 441 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 NECTIN3Q9NQS3 549 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 ZNF490Q9ULM2 529 aaPredicted RBP19.48■□□□□ 0.71
SDC1-205ENST00000447124 CACNA1DQ01668 2161 aa19.48■□□□□ 0.71
SDC1-205ENST00000447124 URADA6NGE7 173 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 GSTA2P09210 222 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 KCNK10P57789 538 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 BTN3A2P78410 334 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 GUCY2DQ02846 1103 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 ILF2Q12905 390 aaKnown RBP19.47■□□□□ 0.71
SDC1-205ENST00000447124 TUBA3CQ13748 450 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 SLBPQ14493 270 aaKnown RBP eCLIP19.47■□□□□ 0.71
SDC1-205ENST00000447124 ZKSCAN8Q15776 578 aaPredicted RBP19.47■□□□□ 0.71
SDC1-205ENST00000447124 INAQ16352 499 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 KBTBD12Q3ZCT8 623 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 TUBA3EQ6PEY2 450 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 TMIGD1Q6UXZ0 262 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 QSOX2Q6ZRP7 698 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 MAMDC2Q7Z304 686 aaPredicted RBP19.47■□□□□ 0.71
SDC1-205ENST00000447124 VN1R5Q7Z5H4 357 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 KIF2BQ8N4N8 673 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 ELP5Q8TE02 316 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 TSPAN17Q96FV3 270 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 SIGLEC12Q96PQ1 595 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 NT5DC2Q9H857 520 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 ANKRD10Q9NXR5 420 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 COPG2Q9UBF2 871 aa19.47■□□□□ 0.71
SDC1-205ENST00000447124 PTBP2Q9UKA9 531 aaKnown RBP19.47■□□□□ 0.71
SDC1-205ENST00000447124 IGKV3D-11A0A0A0MRZ8 115 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 A0A0G2JN53 185 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 PRMT3O60678 531 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 RASAL1O95294 804 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 STSP08842 583 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 RNH1P13489 461 aaKnown RBP19.46■□□□□ 0.71
SDC1-205ENST00000447124 STMN1P16949 149 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 MAOAP21397 527 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 JAK1P23458 1154 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 HNRNPH1P31943 449 aaKnown RBP19.46■□□□□ 0.71
SDC1-205ENST00000447124 MAGEA4P43358 317 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 HSPA7P48741 367 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 ATP6V0D1P61421 351 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 SKP1P63208 163 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 PMP22Q01453 160 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 DLG1Q12959 904 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 MEP1AQ16819 746 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 ZNF766Q5HY98 468 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 GRTP1Q5TC63 336 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 ADNP2Q6IQ32 1131 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 CTAGE3PQ8IX95 158 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 CYP4X1Q8N118 509 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 PPM1NQ8N819 430 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 MDS2Q8NDY4 140 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 NFAM1Q8NET5 270 aaPredicted RBP19.46■□□□□ 0.71
SDC1-205ENST00000447124 DNAJB8Q8NHS0 232 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 MS4A6EQ96DS6 147 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 QRFPRQ96P65 431 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 HES7Q9BYE0 225 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 CDCP1Q9H5V8 836 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 DNAJC11Q9NVH1 559 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 GPRC5BQ9NZH0 403 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 ABI3Q9P2A4 366 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 TXNDC16Q9P2K2 825 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 UTP11Q9Y3A2 253 aaKnown RBP19.46■□□□□ 0.71
SDC1-205ENST00000447124 ASB1Q9Y576 335 aa19.46■□□□□ 0.71
SDC1-205ENST00000447124 CENPEQ02224 2701 aa19.45■□□□□ 0.7
SDC1-205ENST00000447124 TCRBV16S1A1N1A0A5B0 115 aa19.45■□□□□ 0.7
SDC1-205ENST00000447124 LRIT2A6NDA9 550 aa19.45■□□□□ 0.7
SDC1-205ENST00000447124 A8MUA0 341 aa19.45■□□□□ 0.7
SDC1-205ENST00000447124 EPORP19235 508 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms