RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 HHIPL2Q6UWX4 724 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 USP50Q70EL3 339 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 OAFQ86UD1 273 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 XYLT1Q86Y38 959 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LIX1Q8N485 282 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 CMASQ8NFW8 434 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GEMIN6Q8WXD5 167 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 CELF6Q96J87 481 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 HSH2DQ96JZ2 352 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 MCCC1Q96RQ3 725 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ADAM2Q99965 735 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TFB2MQ9H5Q4 396 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 NANSQ9NR45 359 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LIPT1Q9Y234 373 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 NWD2Q9ULI1 1742 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LRRC37A3O60309 1634 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LOC100509620A0A075B734 347 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LOC105369274A0A096LPK9 316 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 A0A0D9SG52 128 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LOC285095A0A1B0GVY8 99 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LINC00862A6NCI5 91 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ZNF487B1APH4 448 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 UBFD1O14562 309 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SIGLEC6O43699 453 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SCGNO76038 276 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 PNPP00491 289 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 UCHL1P09936 223 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ARF4P18085 180 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GSTM3P21266 225 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SLC2A5P22732 501 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 PITPNBP48739 271 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 CLK2P49760 499 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 PDZK1IP1Q13113 114 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TUBB3Q13509 450 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 PTPRNQ16849 979 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 KIAA0930Q6ICG6 404 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TMEM81Q6P7N7 255 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 FAM171BQ6P995 826 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 QSOX2Q6ZRP7 698 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SLC46A3Q7Z3Q1 461 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TMEM200AQ86VY9 491 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 CDH26Q8IXH8 852 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 OR4N4Q8N0Y3 316 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 DEFB106AQ8N104 65 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 PCNPQ8WW12 178 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 RAB3CQ96E17 227 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 NEDD4LQ96PU5 975 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 UHRF1Q96T88 793 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 BHLHE41Q9C0J9 482 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ABCG4Q9H172 646 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 NMRK2Q9NPI5 230 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SLC17A6Q9P2U8 582 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 A0A1B0GVC2 190 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LRRC72A6NJI9 287 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 POM121CA8CG34 1229 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 FGF10O15520 208 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GSRP00390 522 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GKN3PP0CG01 181 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ARP10275 920 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 VAMP1P23763 118 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 OXTRP30559 389 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 NOS2P35228 1153 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 DPP6P42658 865 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 MECP2P51608 486 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 UFM1P61960 85 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TNFRSF17Q02223 184 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GHRHRQ02643 423 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SEMA3BQ13214 749 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 DYRK1AQ13627 763 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 RAB33AQ14088 237 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TMEM132BQ14DG7 1078 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 HIST2H3PS2Q5TEC6 136 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 MAPK15Q8TD08 544 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 C2CD4CQ8TF44 421 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 DNAJB3Q8WWF6 145 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 S100A16Q96FQ6 103 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 RBM14Q96PK6 669 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TSSK3Q96PN8 268 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 PKMYT1Q99640 499 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TSSK6Q9BXA6 273 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ZFP57Q9NU63 452 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GPR83Q9NYM4 423 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 NME7Q9Y5B8 376 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 PCDHB14Q9Y5E9 798 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ZNF541Q9H0D2 1346 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 ZNF705GA8MUZ8 300 aaPredicted RBP4.97□□□□□ -1.61
SCN11A-202ENST00000444237 FADS1O60427 444 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 TLR5O60602 858 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 ALDH1A1P00352 501 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 C1RP00736 705 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 HDCP19113 662 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 S100A11P31949 105 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 HSD17B2P37059 387 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 CLCN4P51793 760 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 OR4D2P58180 307 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 RPS14P62263 151 aaKnown RBP4.97□□□□□ -1.61
SCN11A-202ENST00000444237 SEC23BQ15437 767 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 BATFQ16520 125 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 TKFCQ3LXA3 575 aa4.97□□□□□ -1.61
SCN11A-202ENST00000444237 RAB41Q5JT25 222 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms