RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CCDC88CQ9P219 2028 aa19.85■□□□□ 0.77
CDKN3-204ENST00000442975 ASH1LQ9NR48 2969 aaKnown RBP19.84■□□□□ 0.77
CDKN3-204ENST00000442975 ERI3O43414 337 aaKnown RBP19.84■□□□□ 0.77
CDKN3-204ENST00000442975 ITGAMP11215 1152 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 GNLYP22749 145 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 TYK2P29597 1187 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 HNRNPH1P31943 449 aaKnown RBP19.84■□□□□ 0.77
CDKN3-204ENST00000442975 AP2B1P63010 937 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 BTN3A2P78410 334 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 ARG2P78540 354 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 IRF8Q02556 426 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 DOC2AQ14183 400 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 BTBD16Q32M84 506 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 ADNP2Q6IQ32 1131 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 IGFL2Q6UWQ7 119 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 RIPOR1Q6ZS17 1223 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 TAOK1Q7L7X3 1001 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 CCDC91Q7Z6B0 441 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 GALNT11Q8NCW6 608 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 GAL3ST3Q96A11 431 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 PTCD3Q96EY7 689 aaKnown RBP19.84■□□□□ 0.77
CDKN3-204ENST00000442975 FAR2Q96K12 515 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 PAFAH2Q99487 392 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 EFCAB11Q9BUY7 163 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 SLC29A3Q9BZD2 475 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 AICDAQ9GZX7 198 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 OPTCQ9UBM4 332 aa19.84■□□□□ 0.77
CDKN3-204ENST00000442975 ANKDD1BA6NHY2 528 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 SYCE1LA8MT33 242 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 PRAMEF4O60810 478 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 F10P00742 488 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 ALDOAP04075 364 aaKnown RBP19.83■□□□□ 0.77
CDKN3-204ENST00000442975 RNH1P13489 461 aaKnown RBP19.83■□□□□ 0.77
CDKN3-204ENST00000442975 ICAM2P13598 275 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 GFAPP14136 432 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 GSTM2P28161 218 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 SOX11P35716 441 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 CHIT1Q13231 466 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 SFT2D3Q587I9 215 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 PAGE2BQ5JRK9 111 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 PRAMEF9Q5VWM5 478 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 B3GNTL1Q67FW5 361 aaPredicted RBP19.83■□□□□ 0.77
CDKN3-204ENST00000442975 KLC3Q6P597 504 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 UBTD2Q8WUN7 234 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 SLC44A1Q8WWI5 657 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 SNRNP40Q96DI7 357 aaKnown RBP19.83■□□□□ 0.77
CDKN3-204ENST00000442975 IMMP1LQ96LU5 166 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 PITHD1Q9GZP4 211 aaPredicted RBP19.83■□□□□ 0.77
CDKN3-204ENST00000442975 NFU1Q9UMS0 254 aa19.83■□□□□ 0.77
CDKN3-204ENST00000442975 ANKRD12Q6UB98 2062 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 NUP210LQ5VU65 1888 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 DYTNA2CJ06 578 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 MAGEB17A8MXT2 336 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 POC1B-GALNT4F8VUJ3 575 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 K7EPI3 171 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 EPORP19235 508 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 CD22P20273 847 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 PLA2G16P53816 162 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 OR4D2P58180 307 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 ZNF33BQ06732 778 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 ACTN3Q08043 901 aaPredicted RBP19.82■□□□□ 0.76
CDKN3-204ENST00000442975 ZNF169Q14929 603 aaPredicted RBP19.82■□□□□ 0.76
CDKN3-204ENST00000442975 TLR1Q15399 786 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 PAPD4Q6PIY7 484 aaKnown RBP19.82■□□□□ 0.76
CDKN3-204ENST00000442975 VN1R5Q7Z5H4 357 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 PSMF1Q92530 271 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 NT5DC2Q9H857 520 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 ASF1BQ9NVP2 202 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 PLA2G3Q9NZ20 509 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 ANGPTL3Q9Y5C1 460 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 FLNCQ14315 2725 aa19.82■□□□□ 0.76
CDKN3-204ENST00000442975 A0A088AWK7 358 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 LRIT2A6NDA9 550 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 A8MUI8 341 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 CLEC3AO75596 197 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 RHOXF2BP0C7M4 288 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 ZNF10P21506 573 aaPredicted RBP19.81■□□□□ 0.76
CDKN3-204ENST00000442975 HPDP32754 393 aaPredicted RBP19.81■□□□□ 0.76
CDKN3-204ENST00000442975 MSH2P43246 934 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 HIST2H2ACQ16777 129 aaPredicted RBP19.81■□□□□ 0.76
CDKN3-204ENST00000442975 PFKFB4Q16877 469 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 PLAG1Q6DJT9 500 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 HIST2H2AA3Q6FI13 130 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 MYLK4Q86YV6 388 aaPredicted RBP19.81■□□□□ 0.76
CDKN3-204ENST00000442975 CYP4X1Q8N118 509 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 CA13Q8N1Q1 262 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 TEX9Q8N6V9 391 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 RHEBL1Q8TAI7 183 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 MS4A6EQ96DS6 147 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 WDR34Q96EX3 536 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 SEC16BQ96JE7 1060 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 PTCHD1Q96NR3 888 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 LMF1Q96S06 567 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 LPAR4Q99677 370 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 RHOXF2Q9BQY4 288 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 FUT8Q9BYC5 575 aa19.81■□□□□ 0.76
CDKN3-204ENST00000442975 REXO4Q9GZR2 422 aaKnown RBP19.81■□□□□ 0.76
CDKN3-204ENST00000442975 COPS7BQ9H9Q2 264 aaPredicted RBP19.81■□□□□ 0.76
CDKN3-204ENST00000442975 CPSF2Q9P2I0 782 aaKnown RBP19.81■□□□□ 0.76
CDKN3-204ENST00000442975 COPG2Q9UBF2 871 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms