RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 DGKBQ9Y6T7 804 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 KIF26AQ9ULI4 1882 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 TRBV5-3A0A0A0MS03 114 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 A6NL46 340 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 H3BMQ9 156 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 E2F3O00716 465 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 NIPSNAP2O75323 286 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 ATP6V1B1P15313 513 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 MERTKQ12866 999 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 PMS2P3Q13401 168 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 ART3Q13508 389 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 NAE1Q13564 534 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 NKG7Q16617 165 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 FAM214AQ32MH5 1076 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZC3H12BQ5HYM0 836 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 Q6ZSR9 355 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF438Q7Z4V0 828 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 SLCO6A1Q86UG4 719 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 DCUN1D3Q8IWE4 304 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 CCNYL1Q8N7R7 359 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 RASGEF1AQ8N9B8 481 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 TRPV3Q8NET8 790 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 FNDC8Q8TC99 324 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 PROKR1Q8TCW9 393 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 TWIST2Q8WVJ9 160 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 CCDC74BQ96LY2 380 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 COG8Q96MW5 612 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 GPR21Q99679 349 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 ALG9Q9H6U8 611 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 EML4Q9HC35 981 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 FGF21Q9NSA1 209 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 PCTPQ9UKL6 214 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 CDC14AQ9UNH5 594 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 LHX6Q9UPM6 363 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 DNMT3AQ9Y6K1 912 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 SPTAN1Q13813 2472 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 A0A1W2PP18 115 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 SLC9B1P1A6NJY1 282 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 FADS2P1A8MWK0 482 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 STMND1H3BQB6 276 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 DYRK3O43781 588 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 KERAO60938 352 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 RSL1D1O76021 490 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 TDGF1P13385 188 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 NELFEP18615 380 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 SLC19A1P41440 591 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 STT3AP46977 705 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 DIO3P55073 304 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 UCNP55089 124 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 SH3BGRP55822 239 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 PHEXP78562 749 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 EMX2Q04743 252 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 GPR18Q14330 331 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 MAPRE2Q15555 327 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 DEFB110Q30KQ9 67 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 VPS26BQ4G0F5 336 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 CTSL3PQ5NE16 218 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 CYP2R1Q6VVX0 501 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 TECPR1Q7Z6L1 1165 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR52E4Q8NGH9 312 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR13F1Q8NGS4 319 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 NELL1Q92832 810 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 LINGO1Q96FE5 620 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 BOCQ9BWV1 1114 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 TEX101Q9BY14 249 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 MRPS30Q9NP92 439 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 DDX18Q9NVP1 670 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 BCAP29Q9UHQ4 241 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 KCND3Q9UK17 655 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 MYRFQ9Y2G1 1151 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 KCNE2Q9Y6J6 123 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 TMEM150CB9EJG8 249 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 UBXN8O00124 270 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 PEX14O75381 377 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 SEC14L2O76054 403 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 TSPAN8P19075 237 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 ACRV1P26436 265 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 CA5AP35218 305 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 EIF2S3P41091 472 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 RAB15P59190 212 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 ELOAQ14241 798 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 RPE65Q16518 533 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 DPY19L1Q2PZI1 675 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 HENMT1Q5T8I9 393 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 TMEM71Q6P5X7 295 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 GPR155Q7Z3F1 870 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 SYVN1Q86TM6 617 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 DHFR2Q86XF0 187 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 MSRB3Q8IXL7 192 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 SLC22A18ASQ8N1D0 253 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 CBR4Q8N4T8 237 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 PHF21BQ96EK2 531 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 CNTNAP3BQ96NU0 1288 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 C17orf62Q9BQA9 187 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 CNTNAP3Q9BZ76 1288 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 TRIM8Q9BZR9 551 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 FIS1Q9Y3D6 152 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 PCDHGA4Q9Y5G9 962 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 PCDHGA11Q9Y5H2 935 aa7.08□□□□□ -1.28
CDC42BPA-208ENST00000442054 ATP6AP2A0A1C7CYW4 349 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms