RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 DTX4Q9Y2E6 619 aa5.65□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 PLLPQ9Y342 182 aa5.65□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 MFHAS1Q9Y4C4 1052 aa5.65□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 CLIC4Q9Y696 253 aa5.65□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 OR2AG2A6NM03 316 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 C4orf47A7E2U8 309 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 HRKO00198 91 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 LDLRAD4O15165 306 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 ADAMDEC1O15204 470 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 B4GAT1O43505 415 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 HBP1O60381 514 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 TRIM13O60858 407 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 RPS17P08708 135 aaKnown RBP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 OCM2P0CE71 109 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 OCMP0CE72 109 aaPredicted RBP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 PEPDP12955 493 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 CYP4B1P13584 511 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 POLR2CP19387 275 aaPredicted RBP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 CMA1P23946 247 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 G0S2P27469 103 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 SLC1A1P43005 524 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 PRPS1P60891 318 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 RPL15P61313 204 aaKnown RBP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 MRPL49Q13405 166 aaKnown RBP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 PPIGQ13427 754 aaKnown RBP eCLIP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 BFSP2Q13515 415 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 TMEM63BQ5T3F8 832 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 LRRC66Q68CR7 880 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 TAPT1Q6NXT6 567 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 TRMT10BQ6PF06 316 aaKnown RBP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 TMPRSS9Q7Z410 1059 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 CYP4Z1Q86W10 505 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 SELENOHQ8IZQ5 122 aaKnown RBP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 CPSF7Q8N684 471 aaKnown RBP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 NATD1Q8N6N6 113 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 UXS1Q8NBZ7 420 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 TBC1D16Q8TBP0 767 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 SLC2A14Q8TDB8 520 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 SNX19Q92543 992 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 HAVCR1Q96D42 359 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 OTUB2Q96DC9 234 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 PGAM5Q96HS1 289 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 PRRC1Q96M27 445 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 BIRC8Q96P09 236 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 KLHL5Q96PQ7 755 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 PANX1Q96RD7 426 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 CCNL2Q96S94 520 aaPredicted RBP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 CHP1Q99653 195 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 ASCL2Q99929 193 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 PRRG3Q9BZD7 231 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 DERL2Q9GZP9 239 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 ZMYND12Q9H0C1 365 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 DNTTIP1Q9H147 329 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 TLE6Q9H808 572 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 ZFP57Q9NU63 452 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 ABHD10Q9NUJ1 306 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 GRHL1Q9NZI5 618 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 NDRG4Q9ULP0 352 aaKnown RBP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 HYOU1Q9Y4L1 999 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 COL5A3P25940 1745 aaPredicted RBP5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 MYH6P13533 1939 aa5.64□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 PVALEFA0A1B0GWK0 134 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 PIPSLA2A3N6 862 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 ARHGEF35A5YM69 484 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 SMIM23A6NLE4 172 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 C1QTNF9BB2RNN3 333 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 TCP11X1B4DZS4 312 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 TRAFD1O14545 582 aaPredicted RBP5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 TLX3O43711 291 aaPredicted RBP5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 LPXNO60711 386 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 RPS6KA4O75676 772 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 WDR47O94967 919 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 SHBGP04278 402 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 FABP1P07148 127 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 CHRM2P08172 466 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 VCLP18206 1134 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 CCNOP22674 350 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 CCNE1P24864 410 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 EPHA3P29320 983 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 PKLRP30613 574 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 YWHABP31946 246 aaKnown RBP5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 SLC1A3P43003 542 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 MMP13P45452 471 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 RPL5P46777 297 aaKnown RBP5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 YBX1P67809 324 aaKnown RBP5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 CACNG1Q06432 222 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 BMT2Q1RMZ1 405 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 ZXDCQ2QGD7 858 aaPredicted RBP5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 TEX44Q53QW1 395 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 MARCH8Q5T0T0 291 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 HMBOX1Q6NT76 420 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 KIAA1324Q6UXG2 1013 aaKnown RBP5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 RBM44Q6ZP01 1051 aaKnown RBP5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 KCTD8Q6ZWB6 473 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 NET1Q7Z628 596 aaPredicted RBP5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 SATL1Q86VE3 508 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 SERINC5Q86VE9 423 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 LCORLQ8N3X6 602 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 ATP6V0D2Q8N8Y2 350 aa5.63□□□□□ -1.51
ALMS1-IT1-201ENST00000441587 RASGEF1AQ8N9B8 481 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms