RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 E2F3O00716 465 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 STX16O14662 325 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 NKX2-8O15522 239 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 FOXS1O43638 330 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 DLX3O60479 287 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 SMIM24O75264 130 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 ERLIN1O75477 346 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 ONECUT2O95948 504 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 RAB40ALP0C0E4 278 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 KRT4P19013 534 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 CD22P20273 847 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 ITGAXP20702 1163 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 AGXTP21549 392 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 CXCR2P25025 360 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 CRHR1P34998 444 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 AHRP35869 848 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 OR1D4P47884 311 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 UCNP55089 124 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 RPS15P62841 145 aaKnown RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 REEP5Q00765 189 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 IRF8Q02556 426 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 DNASE1L3Q13609 305 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 GTF2H2Q13888 395 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 E2F2Q14209 437 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 TBCCQ15814 346 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 MUM1Q2TAK8 710 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 COL28A1Q2UY09 1125 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 NKAIN1Q4KMZ8 207 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 XKR6Q5GH73 641 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 ARHGAP40Q5TG30 622 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 GARNL3Q5VVW2 1013 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 GTF2H2CQ6P1K8 395 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 METTL2BQ6P1Q9 378 aaKnown RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 INO80CQ6PI98 192 aaPredicted RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 TMIGD1Q6UXZ0 262 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 RPS27LQ71UM5 84 aaKnown RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 OVCH1Q7RTY7 1134 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 LRRC70Q7Z2Q7 622 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 TMPRSS11BQ86T26 416 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 ASPGQ86U10 573 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 TRABD2AQ86V40 505 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 C4orf33Q8N1A6 199 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 RIBC1Q8N443 379 aaPredicted RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 TBC1D19Q8N5T2 526 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 CSNK1A1LQ8N752 337 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 PTGR2Q8N8N7 351 aaPredicted RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 KCT2Q8NC54 265 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 PROKR1Q8TCW9 393 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 KIAA1143Q96AT1 154 aaPredicted RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 ZBTB9Q96C00 473 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 WDR34Q96EX3 536 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 PTCD3Q96EY7 689 aaKnown RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 SLC45A3Q96JT2 553 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 C10orf90Q96M02 699 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 ZIM3Q96PE6 472 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 DPH2Q9BQC3 489 aaPredicted RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 EFHD1Q9BUP0 239 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 GPR87Q9BY21 358 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 NLNQ9BYT8 704 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 EHD1Q9H4M9 534 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 SOX17Q9H6I2 414 aaPredicted RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 NT5DC2Q9H857 520 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 IPPKQ9H8X2 491 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 ZBTB26Q9HCK0 441 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 ZNF304Q9HCX3 659 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 VTI1BQ9UEU0 232 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 ZFP69BQ9UJL9 534 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 KCND3Q9UK17 655 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 EMCNQ9ULC0 261 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 TMCO1Q9UM00 188 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 MRPS2Q9Y399 296 aaKnown RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 ANGPTL3Q9Y5C1 460 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 PCDHGA6Q9Y5G7 932 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 TNPO3Q9Y5L0 923 aaKnown RBP7.09□□□□□ -1.27
COPS3-203ENST00000439936 MAU2Q9Y6X3 613 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 ASPMQ8IZT6 3477 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 PTPRQQ9UMZ3 2332 aa7.09□□□□□ -1.27
COPS3-203ENST00000439936 A0A0A6YYC8 382 aaPredicted RBP7.08□□□□□ -1.28
COPS3-203ENST00000439936 A0A1B0GX78 115 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 ANKDD1BA6NHY2 528 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 A8MT66 165 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 C21orf140B9A014 251 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 G3V2L1 256 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 I3L1I5 382 aaPredicted RBP7.08□□□□□ -1.28
COPS3-203ENST00000439936 PPP6CO00743 305 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 COPEO14579 308 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 CTIFO43310 598 aaKnown RBP7.08□□□□□ -1.28
COPS3-203ENST00000439936 PLIN3O60664 434 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 ADAM11O75078 769 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 CNOT3O75175 753 aaKnown RBP7.08□□□□□ -1.28
COPS3-203ENST00000439936 GLRA3O75311 464 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 CREG1O75629 220 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 KLF7O75840 302 aaPredicted RBP7.08□□□□□ -1.28
COPS3-203ENST00000439936 SERPIND1P05546 499 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 SMIM10L1P0DMW3 83 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 PIM1P11309 404 aaPredicted RBP7.08□□□□□ -1.28
COPS3-203ENST00000439936 CREB1P16220 341 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 TAC1P20366 129 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 IMPDH1P20839 514 aa7.08□□□□□ -1.28
COPS3-203ENST00000439936 PTPN4P29074 926 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms