RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 OR2L5Q8NG80 312 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 OR52B6Q8NGF0 335 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 PPP4R1Q8TF05 950 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 L3HYPDHQ96EM0 354 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 CMTM7Q96FZ5 175 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 APOPT1Q96IL0 206 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 FAR2Q96K12 515 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 FER1L6-AS2Q96M78 137 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 NSUN5Q96P11 429 aaKnown RBP11.18□□□□□ -0.62
HSPG2-206ENST00000439717 OR1F2PQ96R84 312 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 NPLQ9BXD5 320 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-206ENST00000439717 MS4A8Q9BY19 250 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 ROGDIQ9GZN7 287 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 AICDAQ9GZX7 198 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 ZBTB26Q9HCK0 441 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 PSD3Q9NYI0 1048 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 SENP1Q9P0U3 644 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 MID2Q9UJV3 735 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 C3orf18Q9UK00 162 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 STK38LQ9Y2H1 464 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 ARGFXA6NJG6 315 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 IDSB3KWA1 339 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 G3V2L1 256 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 AGPSO00116 658 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 FOXE1O00358 373 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-206ENST00000439717 FFAR3O14843 346 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 GPR42O15529 346 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 ERI3O43414 337 aaKnown RBP11.17□□□□□ -0.62
HSPG2-206ENST00000439717 SUPT7LO94864 414 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 MLYCDO95822 493 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 HEXBP07686 556 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 ARL1P40616 181 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-206ENST00000439717 XCR1P46094 333 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 ARFIP1P53367 373 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 EMP2P54851 167 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 FOXL2P58012 376 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 DNAJB13P59910 316 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 BTN3A2P78410 334 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 CLCQ05315 142 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 TRAF3Q13114 568 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 ATP1A4Q13733 1029 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 RBBP7Q16576 425 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 CPSF6Q16630 551 aaKnown RBP eCLIP11.17□□□□□ -0.62
HSPG2-206ENST00000439717 KRT71Q3SY84 523 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 UNC50Q53HI1 259 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 ADNP2Q6IQ32 1131 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 ABHD17CQ6PCB6 329 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 LRIG3Q6UXM1 1119 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 CHSY3Q70JA7 882 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 MILR1Q7Z6M3 343 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 LAPTM4BQ86VI4 370 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 SRRM1Q8IYB3 904 aaKnown RBP11.17□□□□□ -0.62
HSPG2-206ENST00000439717 BANPQ8N9N5 519 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 MYRIPQ8NFW9 859 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 HUS1BQ8NHY5 278 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 WDR20Q8TBZ3 569 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 KCNC2Q96PR1 638 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 TMEM237Q96Q45 408 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 SMC6Q96SB8 1091 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 CENPKQ9BS16 269 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 IQCGQ9H095 443 aaKnown RBP11.17□□□□□ -0.62
HSPG2-206ENST00000439717 ING2Q9H160 280 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 SEMA4BQ9NPR2 832 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-206ENST00000439717 ACSS2Q9NR19 701 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 P4HTMQ9NXG6 502 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 HCN3Q9P1Z3 774 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 MKL2Q9ULH7 1088 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 PPT2Q9UMR5 302 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 PLLPQ9Y342 182 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 RNF11Q9Y3C5 154 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 HS3ST3B1Q9Y662 390 aa11.17□□□□□ -0.62
HSPG2-206ENST00000439717 ZNF860A6NHJ4 632 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 C4orf51C9J302 202 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 SOCS6O14544 535 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 RGS16O15492 202 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-206ENST00000439717 CHST10O43529 356 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 B3GALT2O43825 422 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 TGFB1P01137 390 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 FAM87AP0C7U9 286 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 CPA3P15088 417 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 JAK1P23458 1154 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 PTX3P26022 381 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-206ENST00000439717 TSFMP43897 325 aaKnown RBP11.16□□□□□ -0.62
HSPG2-206ENST00000439717 PLA2G16P53816 162 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 MTTPP55157 894 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 CDH13P55290 713 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 KCNAB2Q13303 367 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 ZRSR2Q15696 482 aaKnown RBP11.16□□□□□ -0.62
HSPG2-206ENST00000439717 TUBB8Q3ZCM7 444 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 BEND6Q5SZJ8 279 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-206ENST00000439717 DEPDC1Q5TB30 811 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 KHDRBS2Q5VWX1 349 aaKnown RBP11.16□□□□□ -0.62
HSPG2-206ENST00000439717 TMEM205Q6UW68 189 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 KIRREL2Q6UWL6 708 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 TMEM151BQ8IW70 566 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 PRSS58Q8IYP2 241 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 EXD3Q8N9H8 876 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 CCDC63Q8NA47 563 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 OR4F6Q8NGB9 312 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 OR5T3Q8NGG3 340 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms