RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ADGRD1Q6QNK2 874 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 CHSY3Q70JA7 882 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 PDSS2Q86YH6 399 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 TMEM151BQ8IW70 566 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.88□□□□□ -0.83
MCF2L-216ENST00000439475 TEX9Q8N6V9 391 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 C7orf57Q8NEG2 295 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 ADAMTS18Q8TE60 1221 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 UBTD2Q8WUN7 234 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 DCAKDQ8WVC6 231 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 ATP6V1E2Q96A05 226 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 ISL2Q96A47 359 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 REPS1Q96D71 796 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 LPAR4Q99677 370 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 CENPKQ9BS16 269 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 MFRPQ9BY79 579 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 VN1R1Q9GZP7 353 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 REXO4Q9GZR2 422 aaKnown RBP9.88□□□□□ -0.83
MCF2L-216ENST00000439475 ZNF700Q9H0M5 742 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 EPN3Q9H201 632 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 RHBGQ9H310 441 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 L2HGDHQ9H9P8 463 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 CPSF2Q9P2I0 782 aaKnown RBP9.88□□□□□ -0.83
MCF2L-216ENST00000439475 FETUBQ9UGM5 382 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 TEKT2Q9UIF3 430 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 MRPS33Q9Y291 106 aaKnown RBP9.88□□□□□ -0.83
MCF2L-216ENST00000439475 SCN2AQ99250 2005 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 DOCK10Q96BY6 2186 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 DYTNA2CJ06 578 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 SYNDIG1LA6NDD5 238 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 MAGEB17A8MXT2 336 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 MASP2O00187 686 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 ERI3O43414 337 aaKnown RBP9.87□□□□□ -0.83
MCF2L-216ENST00000439475 KLK8O60259 260 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 PRMT3O60678 531 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 UGDHO60701 494 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 B4GALT2O60909 372 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 VPS4BO75351 444 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 JRKO75564 520 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 PRR35P0CG20 571 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 PCNAP12004 261 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 MTHFD2P13995 350 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 TAC1P20366 129 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 GMPRP36959 345 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 ARL1P40616 181 aaPredicted RBP9.87□□□□□ -0.83
MCF2L-216ENST00000439475 MAGEA12P43365 314 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 PCDH1Q08174 1060 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 HYAL2Q12891 473 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 SLC29A2Q14542 456 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 PCOLCEQ15113 449 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 EXT1Q16394 746 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 NADK2Q4G0N4 442 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 TECRLQ5HYJ1 363 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 GRHL2Q6ISB3 625 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 TIFABQ6ZNK6 161 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 QSOX2Q6ZRP7 698 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 LCA5Q86VQ0 697 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 MYLK4Q86YV6 388 aaPredicted RBP9.87□□□□□ -0.83
MCF2L-216ENST00000439475 LAS2Q8IYD9 372 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 IQCKQ8N0W5 287 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 PLD6Q8N2A8 252 aaKnown RBP9.87□□□□□ -0.83
MCF2L-216ENST00000439475 RBMXL3Q8N7X1 1067 aaKnown RBP9.87□□□□□ -0.83
MCF2L-216ENST00000439475 OR2L5Q8NG80 312 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 OR5T3Q8NGG3 340 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 PPP4R1Q8TF05 950 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 MS4A6EQ96DS6 147 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 MAGEB10Q96LZ2 347 aaPredicted RBP9.87□□□□□ -0.83
MCF2L-216ENST00000439475 PTCHD1Q96NR3 888 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 SERINC2Q96SA4 455 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 MRPL57Q9BQC6 102 aaKnown RBP9.87□□□□□ -0.83
MCF2L-216ENST00000439475 TRIM4Q9C037 500 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 ILKAPQ9H0C8 392 aaPredicted RBP9.87□□□□□ -0.83
MCF2L-216ENST00000439475 MRPL46Q9H2W6 279 aaKnown RBP9.87□□□□□ -0.83
MCF2L-216ENST00000439475 KLHL31Q9H511 634 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 ACTR8Q9H981 624 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 PPCSQ9HAB8 311 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 ZNF490Q9ULM2 529 aaPredicted RBP9.87□□□□□ -0.83
MCF2L-216ENST00000439475 VPS4AQ9UN37 437 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 B3GNT3Q9Y2A9 372 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 PCDHGA11Q9Y5H2 935 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 SPACA6W5XKT8 324 aa9.87□□□□□ -0.83
MCF2L-216ENST00000439475 MGAQ8IWI9 3026 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 STX16-NPEPL1H3BU86 382 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 STX16O14662 325 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 CDC123O75794 336 aaPredicted RBP9.86□□□□□ -0.83
MCF2L-216ENST00000439475 PLA2G16P53816 162 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 MTTPP55157 894 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 MLLT10P55197 1068 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 RAB38P57729 211 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 OR4D2P58180 307 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 OLR1P78380 273 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 MFAP5Q13361 173 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 GTF2H2Q13888 395 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 E2F2Q14209 437 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 ABRAXAS2Q15018 415 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 AP5B1Q2VPB7 878 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 BTBD16Q32M84 506 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 TMEM35AQ53FP2 167 aa9.86□□□□□ -0.83
MCF2L-216ENST00000439475 UBAP2Q5T6F2 1119 aaKnown RBP9.86□□□□□ -0.83
MCF2L-216ENST00000439475 SLC6A19Q695T7 634 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms