RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 ZNF805Q5CZA5 627 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 DUOX1Q9NRD9 1551 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 CYTH4Q9UIA0 394 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 ZNF763Q0D2J5 394 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 C12orf40Q86WS4 652 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 KCNJ9Q92806 393 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 ITGB1BP2Q9UKP3 347 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 PCDHB14Q9Y5E9 798 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 C11orf98E9PRG8 122 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 PLD2O14939 933 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 TRIM36Q9NQ86 728 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 RNF13O43567 381 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 TSPAN9O75954 239 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 PDYNP01213 254 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 PTGR1Q14914 329 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 TPRG1LQ5T0D9 272 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 NOXRED1Q6NXP6 359 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 DNM1P34Q6PK57 102 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 TCEANCQ8N8B7 351 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 ZNF296Q8WUU4 475 aaPredicted RBP16.59■□□□□ 0.25
PTPRF-209ENST00000438120 PLOD2O00469 737 aa16.58■□□□□ 0.25
PTPRF-209ENST00000438120 OR7A10O76100 309 aa16.58■□□□□ 0.25
PTPRF-209ENST00000438120 MRGPRX2Q96LB1 330 aa16.58■□□□□ 0.25
PTPRF-209ENST00000438120 TRPV4Q9HBA0 871 aa16.58■□□□□ 0.25
PTPRF-209ENST00000438120 FZD3Q9NPG1 666 aa16.58■□□□□ 0.25
PTPRF-209ENST00000438120 K7ERQ8 282 aa16.58■□□□□ 0.25
PTPRF-209ENST00000438120 OR12D1P0DN82 309 aa16.58■□□□□ 0.25
PTPRF-209ENST00000438120 PIM1P11309 404 aaPredicted RBP16.58■□□□□ 0.25
PTPRF-209ENST00000438120 GLDCP23378 1020 aa16.58■□□□□ 0.25
PTPRF-209ENST00000438120 APLP1P51693 650 aa16.58■□□□□ 0.25
PTPRF-209ENST00000438120 CAPZA1P52907 286 aa16.58■□□□□ 0.25
PTPRF-209ENST00000438120 ABHD18Q0P651 414 aa16.58■□□□□ 0.25
PTPRF-209ENST00000438120 ZNF630Q2M218 657 aaPredicted RBP16.58■□□□□ 0.25
PTPRF-209ENST00000438120 OR2AT4A6NND4 320 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 SLC22A1O15245 554 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 RLN2P04090 185 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 FPR1P21462 350 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 XYLT2Q9H1B5 865 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 MRM3Q9HC36 420 aaKnown RBP16.58■□□□□ 0.24
PTPRF-209ENST00000438120 SLC2A4RGQ9NR83 387 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 FARSAQ9Y285 508 aaKnown RBP16.58■□□□□ 0.24
PTPRF-209ENST00000438120 A0A1W2PPL8 197 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 FEZF1A0PJY2 475 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 OR6C74A6NCV1 312 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 CLEC3AO75596 197 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 INAVAQ3KP66 663 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 MR1Q95460 341 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 ZNF317Q96PQ6 595 aaPredicted RBP16.58■□□□□ 0.24
PTPRF-209ENST00000438120 IRF2BPLQ9H1B7 796 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 VNN3Q9NY84 501 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 XPNPEP2O43895 674 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 AHSA1O95433 338 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 APOC1P02654 83 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 AOC1P19801 751 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 GMPRP36959 345 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 C9orf43Q8TAL5 461 aaPredicted RBP16.58■□□□□ 0.24
PTPRF-209ENST00000438120 EZH1Q92800 747 aaPredicted RBP16.58■□□□□ 0.24
PTPRF-209ENST00000438120 PARPBPQ9NWS1 579 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 STYXL1Q9Y6J8 313 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 MAU2Q9Y6X3 613 aa16.58■□□□□ 0.24
PTPRF-209ENST00000438120 NFAT5O94916 1531 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 APOL3O95236 402 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 PSKH2Q96QS6 385 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 MCHR1Q99705 422 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 LIN28AQ9H9Z2 209 aaKnown RBP16.57■□□□□ 0.24
PTPRF-209ENST00000438120 RFPL2O75678 378 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 RFC2P35250 354 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 PXYLP1Q8TE99 480 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 MAPKAP1Q9BPZ7 522 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 CREBZFQ9NS37 354 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 AASSQ9UDR5 926 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 PCDHGB1Q9Y5G3 927 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 PCDHGA10Q9Y5H3 936 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 MATN2O00339 956 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 CAPN5O15484 640 aaPredicted RBP16.57■□□□□ 0.24
PTPRF-209ENST00000438120 KAT7O95251 611 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 ASGR2P07307 311 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 JMJD7P0C870 316 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 FGF3P11487 239 aaPredicted RBP16.57■□□□□ 0.24
PTPRF-209ENST00000438120 GRB7Q14451 532 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 FLYWCH1Q4VC44 716 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 TMED4Q7Z7H5 227 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 FAM129BQ96TA1 746 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 ORAI3Q9BRQ5 295 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 SLC22A4Q9H015 551 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 MYADML2A6NDP7 307 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 PCP4L1A6NKN8 68 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 KLF11O14901 512 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 SLC10A2Q12908 348 aaPredicted RBP16.57■□□□□ 0.24
PTPRF-209ENST00000438120 WDR45BQ5MNZ6 344 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 TIFABQ6ZNK6 161 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 C1orf74Q96LT6 269 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 ERMAPQ96PL5 475 aaPredicted RBP16.57■□□□□ 0.24
PTPRF-209ENST00000438120 TSGA13Q96PP4 275 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 SLC6A15Q9H2J7 730 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 REEP4Q9H6H4 257 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 B3GAT2Q9NPZ5 323 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 PEAK1Q9H792 1746 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 IL3P08700 152 aa16.57■□□□□ 0.24
PTPRF-209ENST00000438120 ZNF806P0C7X5 589 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms