RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 IGFBP5P24593 272 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 ITGB7P26010 798 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 TAS2R50P59544 299 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 MVKQ03426 396 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 ABHD18Q0P651 414 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 ERN2Q76MJ5 926 aaKnown RBP9.09□□□□□ -0.95
CUX1-206ENST00000437600 NANOGNBQ7Z5D8 188 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 C11orf96Q7Z7L8 435 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 PLPP6Q8IY26 295 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 ZZZ3Q8IYH5 903 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 NLGN4XQ8N0W4 816 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 AADATQ8N5Z0 425 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 REXO5Q96IC2 774 aaKnown RBP9.09□□□□□ -0.95
CUX1-206ENST00000437600 CCDC115Q96NT0 180 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 UBE2ZQ9H832 354 aaPredicted RBP9.09□□□□□ -0.95
CUX1-206ENST00000437600 FAIMQ9NVQ4 179 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 RLIMQ9NVW2 624 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 BAG5Q9UL15 447 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 SLC6A14Q9UN76 642 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 DOLKQ9UPQ8 538 aa9.09□□□□□ -0.95
CUX1-206ENST00000437600 SLC5A10A0PJK1 596 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 SERPIND1P05546 499 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 POU2F2P09086 479 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 GSTM1P09488 218 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 IDSP22304 550 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 CLK3P49761 638 aaKnown RBP9.08□□□□□ -0.96
CUX1-206ENST00000437600 PTPN5P54829 565 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 AP1S2P56377 157 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 PHEXP78562 749 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 GSTM4Q03013 218 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 FCHO2Q0JRZ9 810 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 CDK5R2Q13319 367 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 IRAK1BP1Q5VVH5 260 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 OR2T5Q6IEZ7 315 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 FAM124AQ86V42 546 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 OR4A15Q8NGL6 344 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 OR2T29Q8NH02 315 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 NELL1Q92832 810 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 COQ10AQ96MF6 247 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 KCNC2Q96PR1 638 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 RBM4BQ9BQ04 359 aaKnown RBP9.08□□□□□ -0.96
CUX1-206ENST00000437600 TRMT61BQ9BVS5 477 aaKnown RBP9.08□□□□□ -0.96
CUX1-206ENST00000437600 RBM4Q9BWF3 364 aaKnown RBP9.08□□□□□ -0.96
CUX1-206ENST00000437600 MKRN2Q9H000 416 aaKnown RBP9.08□□□□□ -0.96
CUX1-206ENST00000437600 FZD3Q9NPG1 666 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 DKK3Q9UBP4 350 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 CORINQ9Y5Q5 1042 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 STON1Q9Y6Q2 735 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 ZNF106Q9H2Y7 1883 aaKnown RBP9.08□□□□□ -0.96
CUX1-206ENST00000437600 PCM1Q15154 2024 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 TSPAN11A1L157 253 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 H0YAE9 185 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 BCKDKO14874 412 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 GCM2O75603 506 aaPredicted RBP9.08□□□□□ -0.96
CUX1-206ENST00000437600 DRD3P35462 400 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 ALDH9A1P49189 494 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 TAP2Q03519 686 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 C2orf80Q0P641 193 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 GANABQ14697 944 aaKnown RBP9.08□□□□□ -0.96
CUX1-206ENST00000437600 SPATS1Q496A3 300 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 ZDHHC20Q5W0Z9 365 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 TTC23Q5W5X9 447 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 SLCO4C1Q6ZQN7 724 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 BTLAQ7Z6A9 289 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 HEATR4Q86WZ0 1026 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 HORMAD1Q86X24 394 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 ZCCHC7Q8N3Z6 543 aaKnown RBP9.08□□□□□ -0.96
CUX1-206ENST00000437600 CPA6Q8N4T0 437 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 OR5K1Q8NHB7 308 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 GIPC3Q8TF64 312 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 TESCQ96BS2 214 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 LRIG1Q96JA1 1093 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 FOPNLQ96NB1 174 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 IL1RAPQ9NPH3 570 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 CD93Q9NPY3 652 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 SPATA6Q9NWH7 488 aaPredicted RBP9.08□□□□□ -0.96
CUX1-206ENST00000437600 SELENONQ9NZV5 590 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 C3orf18Q9UK00 162 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 SNX11Q9Y5W9 270 aa9.08□□□□□ -0.96
CUX1-206ENST00000437600 SOBPA7XYQ1 873 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 M0QX08 132 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 NDUFB5O43674 189 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 CCNDBP1O95273 360 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 RETP07949 1114 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 MPC1LP0DKB6 136 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 IL9P15248 144 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 PORP16435 677 aaPredicted RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 HOXB9P17482 250 aaPredicted RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 HTR1BP28222 390 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 DCDC1P59894 354 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 EMX1Q04741 257 aaPredicted RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 SPCS2Q15005 226 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 MPEG1Q2M385 716 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 BROXQ5VW32 411 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 LIPJQ5W064 366 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 COMMD6Q7Z4G1 85 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 CXorf40AQ8TE69 158 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 MAGED4Q96JG8 741 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 FUNDC2Q9BWH2 189 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 KCNK12Q9HB15 430 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms