RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 VIPP01282 170 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 FURINP09958 794 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 JUNDP17535 347 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 SLC7A1P30825 629 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 GRK3P35626 688 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 GLYATQ6IB77 296 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 CAMKMTQ7Z624 323 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 AQP12AQ8IXF9 295 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 CLEC4FQ8N1N0 589 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 GALNT15Q8N3T1 639 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 AMER3Q8N944 861 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 DNAJB8Q8NHS0 232 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 LRTOMTQ8WZ04 291 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 LRRC61Q9BV99 259 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 KLHL31Q9H511 634 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 AHSPQ9NZD4 102 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 SPASTQ9UBP0 616 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 RAB26Q9ULW5 256 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 V9GYQ6 96 aa20.16■□□□□ 0.82
PTPRF-207ENST00000436724 DHRS12A0PJE2 317 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 SEMA3DO95025 777 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 POLR2CP19387 275 aaPredicted RBP20.15■□□□□ 0.82
PTPRF-207ENST00000436724 POLE2P56282 527 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 PRPF38BQ5VTL8 546 aaKnown RBP20.15■□□□□ 0.82
PTPRF-207ENST00000436724 ZNF551Q7Z340 670 aaPredicted RBP20.15■□□□□ 0.82
PTPRF-207ENST00000436724 CATSPER1Q8NEC5 780 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 ZNF548Q8NEK5 533 aaPredicted RBP20.15■□□□□ 0.82
PTPRF-207ENST00000436724 FLVCR1-AS1Q8TAF5 88 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 CIDECQ96AQ7 238 aaPredicted RBP20.15■□□□□ 0.82
PTPRF-207ENST00000436724 HSPA12BQ96MM6 686 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 PRPF18Q99633 342 aaKnown RBP20.15■□□□□ 0.82
PTPRF-207ENST00000436724 TRIM15Q9C019 465 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 SEMA6AQ9H2E6 1030 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 ATP6V1HQ9UI12 483 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 MUTYHQ9UIF7 546 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 PCDHGB4Q9UN71 923 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 PCDHGB5Q9Y5G0 923 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 TCRBV5S2A0A599 114 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 OR6C74A6NCV1 312 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 LRIT2A6NDA9 550 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 TIPRLO75663 272 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 CD38P28907 300 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 CYP51A1Q16850 503 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 MPEG1Q2M385 716 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 ZNF425Q6IV72 752 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 MAFAQ8NHW3 353 aaPredicted RBP20.15■□□□□ 0.82
PTPRF-207ENST00000436724 DUS3LQ96G46 650 aaKnown RBP20.15■□□□□ 0.82
PTPRF-207ENST00000436724 SH3GL1Q99961 368 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 C17orf62Q9BQA9 187 aa20.15■□□□□ 0.82
PTPRF-207ENST00000436724 GSAPA4D1B5 854 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 C4orf51C9J302 202 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 CLEC3AO75596 197 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 ABCB1P08183 1280 aaPredicted RBP20.14■□□□□ 0.81
PTPRF-207ENST00000436724 BCKDHBP21953 392 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 SERPINB1P30740 379 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 TRPC1P48995 793 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 MAPK12P53778 367 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 CNPY1Q3B7I2 92 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 FAM46DQ8NEK8 389 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 PNPT1Q8TCS8 783 aaKnown RBP20.14■□□□□ 0.81
PTPRF-207ENST00000436724 OR2A14Q96R47 310 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 CENPKQ9BS16 269 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 KLHL25Q9H0H3 589 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 ABCG4Q9H172 646 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 MUC13Q9H3R2 512 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 SIT1Q9Y3P8 196 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 AP4B1Q9Y6B7 739 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 A0A1W2PR77 199 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 C19orf67A6NJJ6 358 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 UBE2IP63279 158 aaKnown RBP20.14■□□□□ 0.81
PTPRF-207ENST00000436724 DMWDQ09019 674 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 HYAL2Q12891 473 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 PDE7AQ13946 482 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 TMEFF1Q8IYR6 380 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 ADGRG5Q8IZF4 528 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 GJD3Q8N144 294 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 MFSD2AQ8NA29 543 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 FIG4Q92562 907 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 RGMAQ96B86 450 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 PPCDCQ96CD2 204 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 CCDC115Q96NT0 180 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 TEFMQ96QE5 360 aaKnown RBP20.14■□□□□ 0.81
PTPRF-207ENST00000436724 CCM2LQ9NUG4 571 aaPredicted RBP20.14■□□□□ 0.81
PTPRF-207ENST00000436724 SPEGQ15772 3267 aa20.14■□□□□ 0.81
PTPRF-207ENST00000436724 CLIC1O00299 241 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 CAPN5O15484 640 aaPredicted RBP20.13■□□□□ 0.81
PTPRF-207ENST00000436724 TMPRSS11DO60235 418 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 TPST1O60507 370 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 CCNDBP1O95273 360 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 SMIM18P0DKX4 95 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 ENGP17813 658 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 GGT1P19440 569 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 MAGP20916 626 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 GZMMP51124 257 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 BLKP51451 505 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 COL9A2Q14055 689 aaPredicted RBP20.13■□□□□ 0.81
PTPRF-207ENST00000436724 AASDHQ4L235 1098 aaPredicted RBP20.13■□□□□ 0.81
PTPRF-207ENST00000436724 AMIGO2Q86SJ2 522 aa20.13■□□□□ 0.81
PTPRF-207ENST00000436724 GALNT4Q8N4A0 578 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms