RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 RBBP5Q15291 538 aaKnown RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 CSRP2Q16527 193 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 AMZ1Q400G9 498 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 RFTN2Q52LD8 501 aaPredicted RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 SPDYAQ5MJ70 313 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 C6orf136Q5SQH8 315 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 C10orf62Q5T681 223 aaPredicted RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 METTL21CQ5VZV1 264 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 TMEM198Q66K66 360 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 IRGCQ6NXR0 463 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 FIGLAQ6QHK4 219 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 C6orf89Q6UWU4 347 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 FAM92BQ6ZTR7 304 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 ACAD11Q709F0 780 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 USP53Q70EK8 1073 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 ADCK2Q7Z695 626 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 SPRED1Q7Z699 444 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 MTDHQ86UE4 582 aaKnown RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 ABCA7Q8IZY2 2146 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 GBP7Q8N8V2 638 aaPredicted RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 OR6C4Q8NGE1 309 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 CEP70Q8NHQ1 597 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 BAHD1Q8TBE0 780 aaPredicted RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 CREB3L4Q8TEY5 395 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 CCT6BQ92526 530 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 NCSTNQ92542 709 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 UBE2E3Q969T4 207 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 ZUFSPQ96AP4 578 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 TUBGCP3Q96CW5 907 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 REPS1Q96D71 796 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 TGM7Q96PF1 710 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 FCRL4Q96PJ5 515 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 TRAPPC9Q96Q05 1148 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 OR2A5Q96R48 311 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 CDC6Q99741 560 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 MAP3K3Q99759 626 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 PITHD1Q9GZP4 211 aaPredicted RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 IRF2BPLQ9H1B7 796 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 MYLK2Q9H1R3 596 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 SEMA6CQ9H3T2 930 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 EPB41L1Q9H4G0 881 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 ZNF385DQ9H6B1 395 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 DMRT3Q9NQL9 472 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 PFDN4Q9NQP4 134 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 RIC8BQ9NVN3 520 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 TMEM9Q9P0T7 183 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 ANKMY1Q9P2S6 941 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 PCDH15Q96QU1 1955 aa6.71□□□□□ -1.33
LSM3P3-201ENST00000436601 LOC105369274A0A096LPK9 316 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 LOC102723532A0A0G2JNH3 316 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 A0A1W2PQM1 296 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 SLC9B1P1A6NJY1 282 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 FLRT2O43155 660 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 ZW10O43264 779 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 HCRTR1O43613 425 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 SH3BP5O60239 455 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 LRP3O75074 770 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 RSL1D1O76021 490 aaKnown RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 TGFB1P01137 390 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 C9P02748 559 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 ALDOCP09972 364 aaKnown RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 HSD3B1P14060 373 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 EZRP15311 586 aaKnown RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 CD1EP15812 388 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 ST6GAL1P15907 406 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 LBPP18428 481 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 CDH3P22223 829 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 PRPH2P23942 346 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 SERPINB1P30740 379 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 GRK6P43250 576 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 RPS13P62277 151 aaKnown RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 CYP4F2P78329 520 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 CCL7P80098 99 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 EMX2Q04743 252 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 TBL3Q12788 808 aaKnown RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 SLC14A1Q13336 389 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 NKG7Q16617 165 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 AP5B1Q2VPB7 878 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 ANKRD39Q53RE8 183 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 NXNQ6DKJ4 435 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 OGFOD2Q6N063 350 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 WDR74Q6RFH5 385 aaPredicted RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 ZNF574Q6ZN55 896 aaPredicted RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 TMPRSS9Q7Z410 1059 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 VN1R4Q7Z5H5 301 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 SPATA19Q7Z5L4 167 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 UBE3DQ7Z6J8 389 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 ZFAND4Q86XD8 727 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 SCUBE1Q8IWY4 988 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 OR4N4Q8N0Y3 316 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 CPSF7Q8N684 471 aaKnown RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 FITM2Q8N6M3 262 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 MFSD9Q8NBP5 474 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 CHAC2Q8WUX2 184 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 CHTF18Q8WVB6 975 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 NAT6Q93015 286 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 TM4SF19Q96DZ7 209 aa6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 C11orf24Q96F05 449 aaPredicted RBP6.71□□□□□ -1.34
LSM3P3-201ENST00000436601 ZDHHC12Q96GR4 267 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms