RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 TSEN54Q7Z6J9 526 aaKnown RBP17.82■□□□□ 0.44
CLK1-205ENST00000434813 CCDC71Q8IV32 467 aaPredicted RBP17.82■□□□□ 0.44
CLK1-205ENST00000434813 METTL4Q8N3J2 472 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 OR2L2Q8NH16 312 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 WDR48Q8TAF3 677 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 MIPOL1Q8TD10 442 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 C16orf78Q8WTQ4 265 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 RORBQ92753 470 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 PPCDCQ96CD2 204 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 MTERF3Q96E29 417 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 SLC35A5Q9BS91 424 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 SPNS1Q9H2V7 528 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 OR51B5Q9H339 312 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 GPR34Q9UPC5 381 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 CDH23Q9H251 3354 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 ADAMDEC1O15204 470 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 GPR37L1O60883 481 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 TGFB1P01137 390 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 ETFAP13804 333 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 RRM2P31350 389 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 BMXP51813 675 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 PHEXP78562 749 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 ELAVL3Q14576 367 aaKnown RBP17.82■□□□□ 0.44
CLK1-205ENST00000434813 ANKDD1AQ495B1 522 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 COX20Q5RI15 118 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 ANGPTL8Q6UXH0 198 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 Q6ZNX1 250 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 ADGRD2Q7Z7M1 963 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 FAM124AQ86V42 546 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 OXR1Q8N573 874 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 UBE2E3Q969T4 207 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 PPP1R16AQ96I34 528 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 TMEM38AQ9H6F2 299 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 RUBCNLQ9H714 662 aa17.82■□□□□ 0.44
CLK1-205ENST00000434813 RANBP2P49792 3224 aaKnown RBP17.82■□□□□ 0.44
CLK1-205ENST00000434813 VEGFDO43915 354 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 POP7O75817 140 aaKnown RBP17.81■□□□□ 0.44
CLK1-205ENST00000434813 KLHL18O94889 574 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 GBAP04062 536 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 C21orf59P57076 290 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 MVKQ03426 396 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 MPEG1Q2M385 716 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 IKBIPQ70UQ0 350 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 LMNTD1Q8N9Z9 388 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 ZDHHC5Q9C0B5 715 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 NDUFAF4Q9P032 175 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 AASSQ9UDR5 926 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 LYVE1Q9Y5Y7 322 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 DENND4AQ7Z401 1863 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 SAP18O00422 153 aaKnown RBP17.81■□□□□ 0.44
CLK1-205ENST00000434813 PI15O43692 258 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 LZTS3O60299 673 aaPredicted RBP17.81■□□□□ 0.44
CLK1-205ENST00000434813 MMP20O60882 483 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 KRT20P35900 424 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 MASP1P48740 699 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 RPP38P78345 283 aaKnown RBP17.81■□□□□ 0.44
CLK1-205ENST00000434813 MC1RQ01726 317 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 C2orf80Q0P641 193 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 SCARB2Q14108 478 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 NFE2L1Q14494 772 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 EIF4HQ15056 248 aaKnown RBP17.81■□□□□ 0.44
CLK1-205ENST00000434813 TMEM52BQ4KMG9 183 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 PRAMEF14Q5SWL7 426 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 SYT6Q5T7P8 510 aaPredicted RBP17.81■□□□□ 0.44
CLK1-205ENST00000434813 PRAMEF13Q5VWM6 474 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 TMC5Q6UXY8 1006 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 CCDC80Q76M96 950 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 ERN2Q76MJ5 926 aaKnown RBP17.81■□□□□ 0.44
CLK1-205ENST00000434813 SVOPQ8N4V2 548 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 SETD7Q8WTS6 366 aaKnown RBP17.81■□□□□ 0.44
CLK1-205ENST00000434813 TRUB1Q8WWH5 349 aaKnown RBP17.81■□□□□ 0.44
CLK1-205ENST00000434813 CIDECQ96AQ7 238 aaPredicted RBP17.81■□□□□ 0.44
CLK1-205ENST00000434813 PLEKHA8Q96JA3 519 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 HRASLS5Q96KN8 279 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 ZNF347Q96SE7 839 aa17.81■□□□□ 0.44
CLK1-205ENST00000434813 YBX2Q9Y2T7 364 aaKnown RBP17.81■□□□□ 0.44
CLK1-205ENST00000434813 KIF26AQ9ULI4 1882 aaPredicted RBP17.8■□□□□ 0.44
CLK1-205ENST00000434813 RGS10O43665 173 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 FAM20BO75063 409 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 MAGEA10P43363 369 aaPredicted RBP17.8■□□□□ 0.44
CLK1-205ENST00000434813 PXNP49023 591 aaPredicted RBP17.8■□□□□ 0.44
CLK1-205ENST00000434813 MLLT10P55197 1068 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 TAS2R50P59544 299 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 MEF2AQ02078 507 aaPredicted RBP17.8■□□□□ 0.44
CLK1-205ENST00000434813 IFI44LQ53G44 452 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 LCTLQ6UWM7 567 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 C11orf96Q7Z7L8 435 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLK1-205ENST00000434813 C12orf76Q8N812 135 aaPredicted RBP17.8■□□□□ 0.44
CLK1-205ENST00000434813 SPPL2AQ8TCT8 520 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 IPCEF1Q8WWN9 437 aaPredicted RBP17.8■□□□□ 0.44
CLK1-205ENST00000434813 SIGLEC11Q96RL6 698 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 OR52A5Q9H2C5 316 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 THSD1Q9NS62 852 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 TBCCD1Q9NVR7 557 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 TAS2R9Q9NYW1 312 aa17.8■□□□□ 0.44
CLK1-205ENST00000434813 PLK4O00444 970 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 SLC22A1O15245 554 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 WBP4O75554 376 aaKnown RBP17.79■□□□□ 0.44
CLK1-205ENST00000434813 MT-ND2P03891 347 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms