RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 MAN1A2O60476 641 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 PRMT3O60678 531 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 PRAMEF2O60811 474 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 NCF1P14598 390 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-213ENST00000434795 STMN1P16949 149 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 GP5P40197 560 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 MAGEA4P43358 317 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 OR4D2P58180 307 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 ATP6V0D1P61421 351 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 OR4D1Q15615 310 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 ZKSCAN8Q15776 578 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-213ENST00000434795 GRTP1Q5TC63 336 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 TMIGD1Q6UXZ0 262 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 FRA10AC1Q70Z53 315 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 ZNF572Q7Z3I7 529 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-213ENST00000434795 ESAMQ96AP7 390 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 MAGEB10Q96LZ2 347 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-213ENST00000434795 C5orf34Q96MH7 638 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 PTCHD1Q96NR3 888 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 LPAR4Q99677 370 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 PHACTR1Q9C0D0 580 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 OLAHQ9NV23 265 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 TXNDC16Q9P2K2 825 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 PTBP2Q9UKA9 531 aaKnown RBP16.79■□□□□ 0.28
CPNE1-213ENST00000434795 ZNF490Q9ULM2 529 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-213ENST00000434795 OSGIN2Q9Y236 505 aa16.79■□□□□ 0.28
CPNE1-213ENST00000434795 NOTCH2Q04721 2471 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 LRIT2A6NDA9 550 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 LRRTM2O43300 516 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 FAM155BO75949 473 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 CLDN1O95832 211 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 TBX6O95947 436 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-213ENST00000434795 UQCRHP07919 91 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 MYBL2P10244 700 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 JAK1P23458 1154 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 SPRP35270 261 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-213ENST00000434795 CD96P40200 585 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 TDGF1P3P51864 188 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 SLC26A5P58743 744 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 BTN3A2P78410 334 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 RUNX2Q13950 521 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 INAQ16352 499 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 MEP1AQ16819 746 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 KBTBD12Q3ZCT8 623 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 TOR1AIP1Q5JTV8 583 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 SULT1C3Q6IMI6 304 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 QSOX2Q6ZRP7 698 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 CRLF3Q8IUI8 442 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 BEST3Q8N1M1 668 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 TCAIMQ8N3R3 496 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 DNAJB8Q8NHS0 232 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 ELP5Q8TE02 316 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 KIAA1191Q96A73 305 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 TMEM79Q9BSE2 394 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 GPRC5BQ9NZH0 403 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 SVILO95425 2214 aa16.78■□□□□ 0.28
CPNE1-213ENST00000434795 TEX15Q9BXT5 2789 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 IGKV3D-11A0A0A0MRZ8 115 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 A1L4Q6 167 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 STK16O75716 305 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 WISP2O76076 250 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 RASAL1O95294 804 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 STSP08842 583 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 RNH1P13489 461 aaKnown RBP16.77■□□□□ 0.28
CPNE1-213ENST00000434795 MST1P26927 711 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 GMPRP36959 345 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 RAB10P61026 200 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 SRSF11Q05519 484 aaKnown RBP16.77■□□□□ 0.28
CPNE1-213ENST00000434795 TUBA3CQ13748 450 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 SLBPQ14493 270 aaKnown RBP eCLIP16.77■□□□□ 0.28
CPNE1-213ENST00000434795 FBXO48Q5FWF7 155 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 TUBA3EQ6PEY2 450 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 VN1R5Q7Z5H4 357 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 ISCA2Q86U28 154 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 CTAGE3PQ8IX95 158 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 CA13Q8N1Q1 262 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 PPM1NQ8N819 430 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 NFAM1Q8NET5 270 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-213ENST00000434795 TTLQ8NG68 377 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 SUN3Q8TAQ9 357 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 FBF1Q8TES7 1133 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 NR4A3Q92570 626 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 MS4A6EQ96DS6 147 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 WDR34Q96EX3 536 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 SEC16BQ96JE7 1060 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 PITHD1Q9GZP4 211 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-213ENST00000434795 RAB17Q9H0T7 212 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 EHD1Q9H4M9 534 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 NECTIN3Q9NQS3 549 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 DNAJC11Q9NVH1 559 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 ABI3Q9P2A4 366 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 PCDHGB6Q9Y5F9 930 aa16.77■□□□□ 0.28
CPNE1-213ENST00000434795 TCRBV16S1A1N1A0A5B0 115 aa16.76■□□□□ 0.27
CPNE1-213ENST00000434795 MAOAP21397 527 aa16.76■□□□□ 0.27
CPNE1-213ENST00000434795 HNRNPH1P31943 449 aaKnown RBP16.76■□□□□ 0.27
CPNE1-213ENST00000434795 HSPA7P48741 367 aa16.76■□□□□ 0.27
CPNE1-213ENST00000434795 ST13P50502 369 aaKnown RBP16.76■□□□□ 0.27
CPNE1-213ENST00000434795 STXBP1P61764 594 aaKnown RBP16.76■□□□□ 0.27
CPNE1-213ENST00000434795 DLG1Q12959 904 aa16.76■□□□□ 0.27
CPNE1-213ENST00000434795 ADPRMQ3LIE5 342 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms